saps 2.8.0 Daniel Schmolze
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/saps | Last Changed Rev: 122710 / Revision: 128728 | Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | ERROR | skipped | | |
tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | [ ERROR ] | skipped | skipped | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | ERROR | skipped | skipped | |
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### Running command:
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### chmod a+r saps -R && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data saps
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* checking for file 'saps/DESCRIPTION' ... OK
* preparing 'saps':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ...Warning: running command '"C:/Users/biocbuild/bbs-3.4-bioc/R/bin/x64/Rscript" --vanilla --default-packages= -e "tools::buildVignettes(dir = '.', tangle = TRUE)"' had status 1
ERROR
Loading required package: survival
Calculating concordance index...done.
Using gene set set1, size = 5
gene set #1 of 2
Calculating P_pure...done.
Calculating P_random...done.
Calculating P_enrichment...Quitting from lines 76-77 (saps.Rmd)
Error: processing vignette 'saps.Rmd' failed with diagnostics:
incorrect number of dimensions
Execution halted