DmelSGI 1.5.2
Bernd Fischer
| Snapshot Date: 2016-05-28 09:20:19 -0700 (Sat, 28 May 2016) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/DmelSGI | | Last Changed Rev: 3773 / Revision: 3781 | | Last Changed Date: 2016-05-15 13:21:08 -0700 (Sun, 15 May 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | NotNeeded | OK | OK | [ OK ] | |
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### Running command:
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### cd DmelSGI.buildbin-libdir/DmelSGI && zip -r ../../DmelSGI_1.5.2.zip . & cd ../..
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Scanning files
adding: data/ (208 bytes security) (stored 0%)
adding: data/datalist (188 bytes security) (deflated 38%)
adding: data/datamatrix.rda (188 bytes security) (deflated 0%)
adding: data/DPiM.rda (188 bytes security) (deflated 0%)
adding: data/FBgn2anno.rda (188 bytes security) (deflated 0%)
adding: data/Features.rda (188 bytes security) (deflated 2%)
adding: data/fitepistasis.rda (188 bytes security) (deflated 0%)
adding: data/Interactions.rda (188 bytes security) (deflated 0%)
adding: data/Intogen.rda (188 bytes security) (deflated 15%)
adding: data/mainEffects.rda (188 bytes security) (deflated 0%)
adding: data/pimatrix.rda (188 bytes security) (deflated 0%)
adding: data/qualityControlFeature.rda (188 bytes security) (stored 0%)
adding: data/qualityControlGene.rda (188 bytes security) (stored 0%)
adding: data/RohnEtAl.rda (188 bytes security) (stored 0%)
adding: data/SelectedClusters.rda (188 bytes security) (stored 0%)
adding: data/SelectedClustersComplexes.rda (188 bytes security) (stored 0%)
adding: data/SKDdata.rda (188 bytes security) (deflated 0%)
adding: data/stabilitySelection.rda (188 bytes security) (deflated 1%)
adding: data/subSampleForStabilitySelection.rda (188 bytes security) (deflated 0%)
adding: data/TID2HUGO.rda (188 bytes security) (stored 0%)
adding: DESCRIPTION (188 bytes security) (deflated 44%)
adding: doc/ (208 bytes security) (stored 0%)
adding: doc/DmelSGI.pdf (188 bytes security) (deflated 11%)
adding: doc/DmelSGI.R (188 bytes security) (deflated 76%)
adding: doc/DmelSGI.Rnw (188 bytes security) (deflated 63%)
adding: doc/index.html (188 bytes security) (deflated 58%)
adding: help/ (208 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 63%)
adding: help/DmelSGI.rdb (188 bytes security) (deflated 2%)
adding: help/DmelSGI.rdx (188 bytes security) (stored 0%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: html/ (208 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 73%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 64%)
adding: MD5 (188 bytes security) (deflated 48%)
adding: Meta/ (208 bytes security) (stored 0%)
adding: Meta/data.rds (188 bytes security) (stored 0%)
adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
adding: Meta/links.rds (188 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: Meta/vignette.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 48%)
adding: NEWS (188 bytes security) (deflated 31%)
adding: preComputedFigures/ (208 bytes security) (stored 0%)
adding: preComputedFigures/DirectionalInteractions-Mitosis.pdf (188 bytes security) (deflated 4%)
adding: R/ (208 bytes security) (stored 0%)
adding: R/DmelSGI (188 bytes security) (deflated 41%)
adding: R/DmelSGI.rdb (188 bytes security) (deflated 2%)
adding: R/DmelSGI.rdx (188 bytes security) (stored 0%)
adding: Rscripts/ (208 bytes security) (stored 0%)
adding: Rscripts/CGDS/ (208 bytes security) (stored 0%)
adding: Rscripts/CGDS/ENSG2HGNC.txt (188 bytes security) (deflated 72%)
adding: Rscripts/CGDS/Fly2Human.txt (188 bytes security) (deflated 76%)
adding: Rscripts/CGDS/scriptCGDSdownload.R (188 bytes security) (deflated 75%)
adding: Rscripts/DataCollectionAndQualityControl/ (208 bytes security) (stored 0%)
adding: Rscripts/DataCollectionAndQualityControl/step-1-createHDF5file10x.R (188 bytes security) (deflated 56%)
adding: Rscripts/DataCollectionAndQualityControl/step-2-collectFiles10x.R (188 bytes security) (deflated 56%)
adding: Rscripts/DataCollectionAndQualityControl/step-3-combine4xand10x.R (188 bytes security) (deflated 65%)
adding: Rscripts/DataCollectionAndQualityControl/step-4-screenOrder2MatrixOrder.R (188 bytes security) (deflated 82%)
adding: Rscripts/DataCollectionAndQualityControl/step-5-QualityControl.R (188 bytes security) (deflated 71%)
adding: Rscripts/imageprocessing/ (208 bytes security) (stored 0%)
adding: Rscripts/imageprocessing/imageProcessingPipeline10x.R (188 bytes security) (deflated 78%)
adding: Rscripts/imageprocessing/imageProcessingPipeline4x.R (188 bytes security) (deflated 79%)
adding: Rscripts/pairwiseInteractionScore/ (208 bytes security) (stored 0%)
adding: Rscripts/pairwiseInteractionScore/step-1-estimatePairwiseInteractions.R (188 bytes security) (deflated 65%)
adding: Rscripts/stabilitySelection/ (208 bytes security) (stored 0%)
adding: Rscripts/stabilitySelection/step-1-stabilityselection.R (188 bytes security) (deflated 68%)