| Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:26:46 -0400 (Thu, 12 Apr 2018).
| Package 740/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ldblock 1.8.1 VJ Carey
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: ldblock |
| Version: 1.8.1 |
| Command: rm -rf ldblock.buildbin-libdir && mkdir ldblock.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ldblock_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ldblock.buildbin-libdir --merge-multiarch ldblock_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ldblock_1.8.1.zip && rm ldblock_1.8.1.tar.gz ldblock_1.8.1.zip |
| StartedAt: 2018-04-11 18:56:24 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:57:44 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 79.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf ldblock.buildbin-libdir && mkdir ldblock.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ldblock_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ldblock.buildbin-libdir --merge-multiarch ldblock_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ldblock_1.8.1.zip && rm ldblock_1.8.1.tar.gz ldblock_1.8.1.zip
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install for i386
* installing *source* package 'ldblock' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'ldblock'
finding HTML links ... done
downloadPopByChr html
expandSnpSet html
hmld html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpUr3zmY/R.INSTALL156031581927/ldblock/man/hmld.Rd:19: missing file link 'read.delim'
ldByGene html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpUr3zmY/R.INSTALL156031581927/ldblock/man/ldByGene.Rd:33: missing file link 'readVcf'
ldblock-package html
ldstruct-class html
s3_1kg html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpUr3zmY/R.INSTALL156031581927/ldblock/man/s3_1kg.Rd:51: missing file link 'TabixFile'
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'ldblock' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ldblock' as ldblock_1.8.1.zip
* DONE (ldblock)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'ldblock' successfully unpacked and MD5 sums checked
In R CMD INSTALL