Back to Multiple platform build/check report for BioC 3.6 experimental data |
This page was generated on 2018-04-12 12:50:23 -0400 (Thu, 12 Apr 2018).
Package 207/326 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
MSstatsBioData 1.0.0 Meena Choi
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | [ OK ] | ![]() |
Package: MSstatsBioData |
Version: 1.0.0 |
Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings MSstatsBioData_1.0.0.tar.gz |
StartedAt: 2018-04-12 10:17:59 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 10:21:55 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 235.9 seconds |
RetCode: 0 |
Status: OK |
CheckDir: MSstatsBioData.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings MSstatsBioData_1.0.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.6-data-experiment/meat/MSstatsBioData.Rcheck’ * using R version 3.4.4 (2018-03-15) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘MSstatsBioData/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘MSstatsBioData’ version ‘1.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘MSstatsBioData’ can be installed ... OK * checking installed package size ... NOTE installed size is 5.1Mb sub-directories of 1Mb or more: data 5.0Mb * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU or elapsed time > 5s user system elapsed DDA_cardio 24.200 0.356 45.543 SRM_crc_training 7.060 0.220 30.183 SRM_crc_validation 5.676 0.228 73.082 SRM_mpm_training 3.640 0.164 16.314 SRM_yeast 3.408 0.152 11.823 SRM_mpm_validation 3.184 0.168 15.121 SRM_ovarian 1.896 0.120 11.440 * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.6-data-experiment/meat/MSstatsBioData.Rcheck/00check.log’ for details.
MSstatsBioData.Rcheck/00install.out
* installing *source* package ‘MSstatsBioData’ ... ** data *** moving datasets to lazyload DB ** inst ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (MSstatsBioData)
MSstatsBioData.Rcheck/MSstatsBioData-Ex.timings
name | user | system | elapsed | |
DDA_cardio | 24.200 | 0.356 | 45.543 | |
SRM_crc_training | 7.060 | 0.220 | 30.183 | |
SRM_crc_validation | 5.676 | 0.228 | 73.082 | |
SRM_mpm_training | 3.640 | 0.164 | 16.314 | |
SRM_mpm_validation | 3.184 | 0.168 | 15.121 | |
SRM_ovarian | 1.896 | 0.120 | 11.440 | |
SRM_yeast | 3.408 | 0.152 | 11.823 | |