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INSTALL report for BiSeq on tokay1

This page was generated on 2019-04-13 11:22:50 -0400 (Sat, 13 Apr 2019).

Package 166/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiSeq 1.22.0
Katja Hebestreit
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/BiSeq
Branch: RELEASE_3_8
Last Commit: ca0eb05
Last Changed Date: 2018-10-30 11:41:51 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BiSeq
Version: 1.22.0
Command: C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch BiSeq
StartedAt: 2019-04-12 20:33:30 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:34:31 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 60.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
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###   C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch BiSeq
###
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* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
* installing *source* package 'BiSeq' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BiSeq'
    finding HTML links ... done
    BSraw-class                             html  
    finding level-2 HTML links ... done

    BSrel-class                             html  
    DMRs                                    html  
    annotateGRanges                         html  
    betaRegression                          html  
    betaResults                             html  
    betaResultsNull                         html  
    binomLikelihoodSmooth                   html  
    clusterSites                            html  
    clusterSitesToGR                        html  
    compareTwoSamples                       html  
    covBoxplots                             html  
    covStatistics                           html  
    estLocCor                               html  
    filterByCov                             html  
    filterBySharedRegions                   html  
    findDMRs                                html  
    globalTest                              html  
    limitCov                                html  
    logisticRegression                      html  
    makeVariogram                           html  
    plotBindingSites                        html  
    plotMeth                                html  
    plotMethMap                             html  
    plotSmoothMeth                          html  
    predictMeth                             html  
    predictedMeth                           html  
    promoters                               html  
    rawToRel                                html  
    readBismark                             html  
    rrbs                                    html  
    smoothVariogram                         html  
    summarizeRegions                        html  
    testClusters                            html  
    trimClusters                            html  
    vario                                   html  
    writeBED                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (BiSeq)
Making 'packages.html' ... done
In R CMD INSTALL