Hong Pan
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/GEM |
| Branch: RELEASE_3_8 |
| Last Commit: 79d822c |
| Last Changed Date: 2018-10-30 11:42:01 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:26:47 -0400 (Sat, 13 Apr 2019).
| Package 586/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GEM 1.8.0 Hong Pan
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: GEM |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/GEM_1.8.0.tar.gz && rm -rf GEM.buildbin-libdir && mkdir GEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEM.buildbin-libdir GEM_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL GEM_1.8.0.zip && rm GEM_1.8.0.tar.gz GEM_1.8.0.zip |
| StartedAt: 2019-04-12 18:50:40 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 18:51:19 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 39.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/GEM_1.8.0.tar.gz && rm -rf GEM.buildbin-libdir && mkdir GEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEM.buildbin-libdir GEM_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL GEM_1.8.0.zip && rm GEM_1.8.0.tar.gz GEM_1.8.0.zip
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install for i386
* installing *source* package 'GEM' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GEM'
finding HTML links ... done
GEM-package html
GEM_Emodel html
GEM_GUI html
GEM_GWASmodel html
GEM_Gmodel html
GEM_GxEmodel html
SlicedData-class html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpKu6VhD/R.INSTALL10fc6f1325d6/GEM/man/SlicedData-class.Rd:89: file link 'rowMeans' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpKu6VhD/R.INSTALL10fc6f1325d6/GEM/man/SlicedData-class.Rd:90: file link 'rowSums' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpKu6VhD/R.INSTALL10fc6f1325d6/GEM/man/SlicedData-class.Rd:91: file link 'colMeans' in package 'base' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'GEM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GEM' as GEM_1.8.0.zip
* DONE (GEM)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'GEM' successfully unpacked and MD5 sums checked
In R CMD INSTALL