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This page was generated on 2019-04-16 11:59:36 -0400 (Tue, 16 Apr 2019).
Package 707/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Harman 1.10.0 Jason Ross
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] |
Package: Harman |
Version: 1.10.0 |
Command: rm -rf Harman.buildbin-libdir && mkdir Harman.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Harman_1.10.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R Harman.buildbin-libdir |
StartedAt: 2019-04-16 04:11:33 -0400 (Tue, 16 Apr 2019) |
EndedAt: 2019-04-16 04:12:18 -0400 (Tue, 16 Apr 2019) |
EllapsedTime: 45.5 seconds |
RetCode: 0 |
Status: OK |
PackageFile: Harman_1.10.0.tgz |
PackageFileSize: 2.342 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Harman.buildbin-libdir && mkdir Harman.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Harman_1.10.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R Harman.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=Harman.buildbin-libdir Harman_1.10.0.tar.gz' >>>>>>> * installing *source* package ‘Harman’ ... ** libs clang++ -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_ARRAYALIGNEMT=4 -D_USE_RCPP=1 -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include `/Library/Frameworks/R.framework/Resources/bin/Rscript -e "Rcpp:::CxxFlags()"` -I. -fPIC -Wall -g -O2 -c Harman.cpp -o Harman.o In file included from Harman.cpp:182: ./CSelectRandom.h:392:11: warning: unused variable 'currindex' [-Wunused-variable] size_t currindex ; ^ ./CSelectRandom.h:638:20: warning: unused variable 'ts1' [-Wunused-variable] struct timespec ts1, ts2 ; ^ ./CSelectRandom.h:638:25: warning: unused variable 'ts2' [-Wunused-variable] struct timespec ts1, ts2 ; ^ ./CSelectRandom.h:639:18: warning: unused variable 'time2' [-Wunused-variable] double time1, time2 ; ^ ./CSelectRandom.h:639:11: warning: unused variable 'time1' [-Wunused-variable] double time1, time2 ; ^ ./CSelectRandom.h:1019:23: warning: unused variable 'randData2' [-Wunused-variable] size_t randData1, randData2 ; ^ 6 warnings generated. clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o Harman.so Harman.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.8-bioc/meat/Harman.buildbin-libdir/Harman/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Harman) >>>>>>> >>>>>>> FIXING LINKS FOR Harman.buildbin-libdir/Harman/libs//Harman.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "Harman.buildbin-libdir/Harman/libs//Harman.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "Harman.buildbin-libdir/Harman/libs//Harman.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "Harman.buildbin-libdir/Harman/libs//Harman.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "Harman.buildbin-libdir/Harman/libs//Harman.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "Harman.buildbin-libdir/Harman/libs//Harman.so"