Yu Kong
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/MADSEQ |
| Branch: RELEASE_3_8 |
| Last Commit: df64e91 |
| Last Changed Date: 2018-10-30 11:42:01 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:26:47 -0400 (Sat, 13 Apr 2019).
| Package 865/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| MADSEQ 1.8.0 Yu Kong
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: MADSEQ |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/MADSEQ_1.8.0.tar.gz && rm -rf MADSEQ.buildbin-libdir && mkdir MADSEQ.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MADSEQ.buildbin-libdir MADSEQ_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL MADSEQ_1.8.0.zip && rm MADSEQ_1.8.0.tar.gz MADSEQ_1.8.0.zip |
| StartedAt: 2019-04-12 20:08:08 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:09:18 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 70.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/MADSEQ_1.8.0.tar.gz && rm -rf MADSEQ.buildbin-libdir && mkdir MADSEQ.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MADSEQ.buildbin-libdir MADSEQ_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL MADSEQ_1.8.0.zip && rm MADSEQ_1.8.0.tar.gz MADSEQ_1.8.0.zip
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install for i386
* installing *source* package 'MADSEQ' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MADSEQ'
finding HTML links ... done
MADSEQ-package html
MadSeq html
aneuploidy_chr18 html
deltaBIC html
normalizeCoverage html
finding level-2 HTML links ... done
plotFraction html
plotMadSeq html
plotMixture html
posterior html
prepareCoverageGC html
prepareHetero html
runMadSeq html
summary-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'MADSEQ' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MADSEQ' as MADSEQ_1.8.0.zip
* DONE (MADSEQ)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'MADSEQ' successfully unpacked and MD5 sums checked
In R CMD INSTALL