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INSTALL report for OGSA on tokay1

This page was generated on 2019-04-13 11:25:43 -0400 (Sat, 13 Apr 2019).

Package 1074/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OGSA 1.12.0
Michael F. Ochs
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/OGSA
Branch: RELEASE_3_8
Last Commit: 502f31c
Last Changed Date: 2018-10-30 11:41:58 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: OGSA
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/OGSA_1.12.0.tar.gz && rm -rf OGSA.buildbin-libdir && mkdir OGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OGSA.buildbin-libdir OGSA_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL OGSA_1.12.0.zip && rm OGSA_1.12.0.tar.gz OGSA_1.12.0.zip
StartedAt: 2019-04-12 18:58:59 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 18:59:27 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 28.8 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/OGSA_1.12.0.tar.gz && rm -rf OGSA.buildbin-libdir && mkdir OGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OGSA.buildbin-libdir OGSA_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL OGSA_1.12.0.zip && rm OGSA_1.12.0.tar.gz OGSA_1.12.0.zip
###
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install for i386

* installing *source* package 'OGSA' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'OGSA'
    finding HTML links ... done
    OGSA-package                            html  
    cnv                                     html  
    copaInt                                 html  
    copaIntE                                html  
    copaStat                                html  
    expr                                    html  
    expressionSetDataSet                    html  
    expressionSetPheno                      html  
    meth                                    html  
    outCallRank                             html  
    outCallRankE                            html  
    outCallTib                              html  
    outCallTibE                             html  
    outCount                                html  
    outMap                                  html  
    outRank                                 html  
    pathGS                                  html  
    pheno                                   html  
    testGScogps                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'OGSA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OGSA' as OGSA_1.12.0.zip
* DONE (OGSA)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'OGSA' successfully unpacked and MD5 sums checked
In R CMD INSTALL