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BUILD report for RamiGO on malbec1

This page was generated on 2019-04-16 11:49:15 -0400 (Tue, 16 Apr 2019).

Package 1245/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RamiGO 1.30.0
Markus Schroeder
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/RamiGO
Branch: RELEASE_3_8
Last Commit: 2f84aae
Last Changed Date: 2018-10-30 11:41:47 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK [ ERROR ] skipped 
merida1 OS X 10.11.6 El Capitan / x86_64 ...NOT SUPPORTED...

Summary

Package: RamiGO
Version: 1.30.0
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RamiGO
StartedAt: 2019-04-15 19:09:11 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 19:09:25 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 14.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RamiGO
###
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* checking for file ‘RamiGO/DESCRIPTION’ ... OK
* preparing ‘RamiGO’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX .
Creating pdf output from LaTeX ...

This is pdfTeX, Version 3.14159265-2.6-1.40.16 (TeX Live 2015/Debian) (preloaded format=pdflatex)
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entering extended mode
LaTeX2e <2016/02/01>
Babel <3.9q> and hyphenation patterns for 29 language(s) loaded.
(./Rd2.tex (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2014/09/29 v1.4h Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(/home/biocbuild/bbs-3.8-bioc/R/share/texmf/tex/latex/Rd.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty)
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`inconsolata-zi4' v1.10, 2016/02/22 Text macros for Inconsolata (msharpe)
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 []\T1/zi4/m/n/9 ss <- getAmigoTree(goIDs=goIDs,color=color,filename="example",
picType="svg",saveResult=FALSE)[] 

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 []\T1/zi4/m/n/9 dd <- getAmigoTree(goIDs=goIDs,color=color,filename="example",
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[9]
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 []\T1/zi4/m/n/9 #goIDs <- c("GO:0051130","GO:0050789","GO:0019912","GO:0016301
","GO:0003824","GO:0005783","GO:0043229")[] 
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No file Rd2.ind.
[12] (/tmp/RtmpbPr8Vg/Rbuild60649959fe6/RamiGO/.Rd2pdf24676/Rd2.aux)

Package rerunfilecheck Warning: File `Rd2.out' has changed.
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Output written on Rd2.pdf (12 pages, 106384 bytes).
Transcript written on Rd2.log.
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picType="svg",saveResult=FALSE)[] 

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 []\T1/zi4/m/n/9 #goIDs <- c("GO:0051130","GO:0050789","GO:0019912","GO:0016301
","GO:0003824","GO:0005783","GO:0043229")[] 
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