'Raik Otto'
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/Uniquorn |
| Branch: RELEASE_3_8 |
| Last Commit: 9a1b9e4 |
| Last Changed Date: 2019-01-04 13:08:11 -0400 (Fri, 04 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:26:25 -0400 (Sat, 13 Apr 2019).
| Package 1612/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Uniquorn 2.2.1 'Raik Otto'
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | NA | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: Uniquorn |
| Version: 2.2.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/Uniquorn_2.2.1.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.2.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.2.1.zip && rm Uniquorn_2.2.1.tar.gz Uniquorn_2.2.1.zip |
| StartedAt: 2019-04-12 20:04:34 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:05:36 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 61.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/Uniquorn_2.2.1.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.2.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.2.1.zip && rm Uniquorn_2.2.1.tar.gz Uniquorn_2.2.1.zip
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install for i386
* installing *source* package 'Uniquorn' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'GenomicRanges::shift' by 'data.table::shift' when loading 'Uniquorn'
** help
*** installing help indices
converting help for package 'Uniquorn'
finding HTML links ... done
add_custom_vcf_to_database html
add_missing_cls html
add_p_q_values_statistics html
add_penalty_statistics html
create_bed_file html
identify_vcf_file html
init_and_load_identification html
initiate_canonical_databases html
match_query_ccl_to_database html
parse_ccle_genotype_data html
parse_cosmic_genotype_data html
parse_vcf_file html
parse_vcf_query_into_db html
read_library_names html
read_mutation_grange_objects html
remove_ccls_from_database html
remove_library_from_database html
show_contained_ccls html
show_contained_variants_for_ccl html
show_contained_variants_in_library html
show_which_ccls_contain_variant html
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'GenomicRanges::shift' by 'data.table::shift' when loading 'Uniquorn'
In R CMD INSTALL
install for x64
* installing *source* package 'Uniquorn' ...
** testing if installed package can be loaded
Warning: replacing previous import 'GenomicRanges::shift' by 'data.table::shift' when loading 'Uniquorn'
* MD5 sums
packaged installation of 'Uniquorn' as Uniquorn_2.2.1.zip
* DONE (Uniquorn)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'Uniquorn' successfully unpacked and MD5 sums checked
In R CMD INSTALL