Raymond G. Cavalcante
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/annotatr |
| Branch: RELEASE_3_8 |
| Last Commit: 15163fb |
| Last Changed Date: 2018-10-30 11:42:03 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:27:15 -0400 (Sat, 13 Apr 2019).
| Package 61/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| annotatr 1.8.0 Raymond G. Cavalcante
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: annotatr |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/annotatr_1.8.0.tar.gz && rm -rf annotatr.buildbin-libdir && mkdir annotatr.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotatr.buildbin-libdir annotatr_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL annotatr_1.8.0.zip && rm annotatr_1.8.0.tar.gz annotatr_1.8.0.zip |
| StartedAt: 2019-04-12 20:00:21 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:01:30 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 68.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/annotatr_1.8.0.tar.gz && rm -rf annotatr.buildbin-libdir && mkdir annotatr.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotatr.buildbin-libdir annotatr_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL annotatr_1.8.0.zip && rm annotatr_1.8.0.tar.gz annotatr_1.8.0.zip
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install for i386
* installing *source* package 'annotatr' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'annotatr'
finding HTML links ... done
annotate_regions html
annotations html
annotatr html
annotatr_cache html
build_ah_annots html
build_annotations html
build_cpg_annots html
build_enhancer_annots html
build_gene_annots html
build_hmm_annots html
build_lncrna_annots html
builtin_annotations html
builtin_genomes html
check_annotations html
expand_annotations html
get_cellline_from_code html
get_cellline_from_shortcut html
get_orgdb_name html
get_txdb_name html
plot_annotation html
plot_categorical html
plot_coannotations html
plot_numerical html
plot_numerical_coannotations html
randomize_regions html
read_annotations html
read_regions html
reformat_hmm_codes html
subset_order_tbl html
summarize_annotations html
summarize_categorical html
summarize_numerical html
tidy_annotations html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'annotatr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'annotatr' as annotatr_1.8.0.zip
* DONE (annotatr)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'annotatr' successfully unpacked and MD5 sums checked
In R CMD INSTALL