Back to Multiple platform build/check report for BioC 3.8
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for cnvGSA on tokay1

This page was generated on 2019-04-13 11:22:08 -0400 (Sat, 13 Apr 2019).

Package 294/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cnvGSA 1.26.0
Joseph Lugo
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/cnvGSA
Branch: RELEASE_3_8
Last Commit: db6759f
Last Changed Date: 2018-10-30 11:41:49 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: cnvGSA
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/cnvGSA_1.26.0.tar.gz && rm -rf cnvGSA.buildbin-libdir && mkdir cnvGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cnvGSA.buildbin-libdir cnvGSA_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL cnvGSA_1.26.0.zip && rm cnvGSA_1.26.0.tar.gz cnvGSA_1.26.0.zip
StartedAt: 2019-04-12 19:38:17 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:39:02 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 45.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/cnvGSA_1.26.0.tar.gz && rm -rf cnvGSA.buildbin-libdir && mkdir cnvGSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cnvGSA.buildbin-libdir cnvGSA_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL cnvGSA_1.26.0.zip && rm cnvGSA_1.26.0.tar.gz cnvGSA_1.26.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  222k  100  222k    0     0  5651k      0 --:--:-- --:--:-- --:--:-- 6175k

install for i386

* installing *source* package 'cnvGSA' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cnvGSA'
    finding HTML links ... done
    CnvGSAInput-class                       html  
    CnvGSAOutput-class                      html  
    cnvGSA-package                          html  
    cnvGSAIn                                html  
    cnvGSAgsTables                          html  
    cnvGSAlogRegTest                        html  
    f.enrFiles                              html  
    f.makeViz                               html  
    f.readConfig                            html  
** building package indices
** installing vignettes
   'cnvGSA-vignette.Rnw' 
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'cnvGSA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cnvGSA' as cnvGSA_1.26.0.zip
* DONE (cnvGSA)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'cnvGSA' successfully unpacked and MD5 sums checked
In R CMD INSTALL