Zhilong Jia
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/cogena |
| Branch: RELEASE_3_8 |
| Last Commit: e6f596c |
| Last Changed Date: 2018-10-30 11:41:57 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:25:11 -0400 (Sat, 13 Apr 2019).
| Package 305/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| cogena 1.16.0 Zhilong Jia
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: cogena |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/cogena_1.16.0.tar.gz && rm -rf cogena.buildbin-libdir && mkdir cogena.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cogena.buildbin-libdir cogena_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL cogena_1.16.0.zip && rm cogena_1.16.0.tar.gz cogena_1.16.0.zip |
| StartedAt: 2019-04-12 19:26:51 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:29:00 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 128.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/cogena_1.16.0.tar.gz && rm -rf cogena.buildbin-libdir && mkdir cogena.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cogena.buildbin-libdir cogena_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL cogena_1.16.0.zip && rm cogena_1.16.0.tar.gz cogena_1.16.0.zip
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install for i386
* installing *source* package 'cogena' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'class::somgrid' by 'kohonen::somgrid' when loading 'cogena'
** help
*** installing help indices
converting help for package 'cogena'
finding HTML links ... done
AllGeneSymbols html
DEexprs html
PEI html
Psoriasis html
clEnrich html
clEnrich_one html
clusterMethods html
coExp html
cogena_class html
cogena_package html
corInCluster html
enrichment html
gene2set html
geneExpInCluster html
geneInCluster html
genecl_class html
geneclusters html
gmt2list html
gmtlist2file html
heatmap.3 html
heatmapCluster html
heatmapCmap html
heatmapPEI html
mat html
nClusters html
pClusters html
sampleLabel html
show html
sota html
summary html
upDownGene html
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'class::somgrid' by 'kohonen::somgrid' when loading 'cogena'
In R CMD INSTALL
install for x64
* installing *source* package 'cogena' ...
** testing if installed package can be loaded
Warning: replacing previous import 'class::somgrid' by 'kohonen::somgrid' when loading 'cogena'
* MD5 sums
packaged installation of 'cogena' as cogena_1.16.0.zip
* DONE (cogena)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'cogena' successfully unpacked and MD5 sums checked
In R CMD INSTALL