Caleb Lareau
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/diffloop |
| Branch: RELEASE_3_8 |
| Last Commit: 442a0b0 |
| Last Changed Date: 2018-10-30 11:42:01 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:26:42 -0400 (Sat, 13 Apr 2019).
| Package 412/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| diffloop 1.10.0 Caleb Lareau
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: diffloop |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/diffloop_1.10.0.tar.gz && rm -rf diffloop.buildbin-libdir && mkdir diffloop.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=diffloop.buildbin-libdir diffloop_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL diffloop_1.10.0.zip && rm diffloop_1.10.0.tar.gz diffloop_1.10.0.zip |
| StartedAt: 2019-04-12 20:07:53 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:08:55 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 61.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/diffloop_1.10.0.tar.gz && rm -rf diffloop.buildbin-libdir && mkdir diffloop.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=diffloop.buildbin-libdir diffloop_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL diffloop_1.10.0.zip && rm diffloop_1.10.0.tar.gz diffloop_1.10.0.zip
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install for i386
* installing *source* package 'diffloop' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'GenomicRanges::windows' by 'grDevices::windows' when loading 'diffloop'
** help
*** installing help indices
converting help for package 'diffloop'
finding HTML links ... done
addchr html
annotateAnchors html
annotateAnchors.bed html
annotateAnchors.bigwig html
annotateLoops html
annotateLoops.dge html
bedToGRanges html
calcLDSizeFactors html
callCCDs html
computeBoundaryScores html
diffloop html
dim-loops-method html
featureTest html
filterLoops html
filterSpanningLoops html
geneinfo html
getHumanGenes html
getHumanTSS html
getMouseGenes html
getMouseTSS html
head-loops-method html
human.genes html
interchromosomal html
intrachromosomal html
keepCTCFloops html
keepEPloops html
loopAssoc html
loopDistancePlot html
loopGenes html
loopMetrics html
loopPlot html
loopWidth html
loops-class html
loops.small html
loopsMake html
loopsMake.mango html
loopsSubset html
mangoCorrection html
manyLoopPlots html
mergeAnchors html
numAnchors html
numLoops html
padGRanges html
pcaPlot html
plotTopLoops html
quickAssoc html
quickAssocVoom html
removeRegion html
removeSelfLoops html
rmchr html
sampleNames-loops-method html
slidingWindowTest html
splitSamples html
sub-loops-numeric-numeric-missing-method
html
subsetLoops html
subsetRegion html
subsetRegionAB html
summary-loops-method html
tail-loops-method html
topLoops html
union-loops-loops-method html
updateLDGroups html
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'GenomicRanges::windows' by 'grDevices::windows' when loading 'diffloop'
In R CMD INSTALL
install for x64
* installing *source* package 'diffloop' ...
** testing if installed package can be loaded
Warning: replacing previous import 'GenomicRanges::windows' by 'grDevices::windows' when loading 'diffloop'
* MD5 sums
packaged installation of 'diffloop' as diffloop_1.10.0.zip
* DONE (diffloop)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'diffloop' successfully unpacked and MD5 sums checked
In R CMD INSTALL