Luke Zappia
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/splatter |
| Branch: RELEASE_3_8 |
| Last Commit: b809a81 |
| Last Changed Date: 2018-12-05 17:48:38 -0400 (Wed, 05 Dec 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:27:28 -0400 (Sat, 13 Apr 2019).
| Package 1491/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| splatter 1.6.1 Luke Zappia
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | NA | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | ERROR | OK |
| Package: splatter |
| Version: 1.6.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/splatter_1.6.1.tar.gz && rm -rf splatter.buildbin-libdir && mkdir splatter.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=splatter.buildbin-libdir splatter_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL splatter_1.6.1.zip && rm splatter_1.6.1.tar.gz splatter_1.6.1.zip |
| StartedAt: 2019-04-12 20:33:29 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:34:58 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 88.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/splatter_1.6.1.tar.gz && rm -rf splatter.buildbin-libdir && mkdir splatter.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=splatter.buildbin-libdir splatter_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL splatter_1.6.1.zip && rm splatter_1.6.1.tar.gz splatter_1.6.1.zip
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install for i386
* installing *source* package 'splatter' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'splatter'
finding HTML links ... done
BASiCSEstimate html
BASiCSParams html
BASiCSSimulate html
Lun2Params html
LunParams html
MFAParams html
Params html
PhenoParams html
SCDDParams html
SimpleParams html
SparseDCParams html
SplatParams html
ZINBParams html
addFeatureStats html
finding level-2 HTML links ... done
addGeneLengths html
bridge html
compareSCEs html
diffSCEs html
expandParams html
getLNormFactors html
getParam html
getParams html
getPathOrder html
listSims html
logistic html
lun2Estimate html
lun2Simulate html
lunEstimate html
lunSimulate html
makeCompPanel html
makeDiffPanel html
makeOverallPanel html
mfaEstimate html
mfaSimulate html
newParams html
phenoEstimate html
phenoSimulate html
rbindMatched html
scDDEstimate html
scDDSimulate html
setParam html
setParamUnchecked html
setParams html
setParamsUnchecked html
showDFs html
showPP html
showValues html
simpleEstimate html
simpleSimulate html
sparseDCEstimate html
sparseDCSimulate html
splatEstBCV html
splatEstDropout html
splatEstLib html
splatEstMean html
splatEstOutlier html
splatEstimate html
splatSimBCVMeans html
splatSimBatchCellMeans html
splatSimBatchEffects html
splatSimCellMeans html
splatSimDE html
splatSimDropout html
splatSimGeneMeans html
splatSimLibSizes html
splatSimTrueCounts html
splatSimulate html
splatter html
summariseDiff html
winsorize html
zinbEstimate html
zinbSimulate html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'splatter' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'splatter' as splatter_1.6.1.zip
* DONE (splatter)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'splatter' successfully unpacked and MD5 sums checked
In R CMD INSTALL