Koen Van den Berge
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/stageR |
| Branch: RELEASE_3_8 |
| Last Commit: bf61ea3 |
| Last Changed Date: 2018-10-30 11:42:06 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:28:30 -0400 (Sat, 13 Apr 2019).
| Package 1511/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| stageR 1.4.0 Koen Van den Berge
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | NA | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: stageR |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/stageR_1.4.0.tar.gz && rm -rf stageR.buildbin-libdir && mkdir stageR.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=stageR.buildbin-libdir stageR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL stageR_1.4.0.zip && rm stageR_1.4.0.tar.gz stageR_1.4.0.zip |
| StartedAt: 2019-04-12 19:41:21 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:42:00 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 39.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/stageR_1.4.0.tar.gz && rm -rf stageR.buildbin-libdir && mkdir stageR.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=stageR.buildbin-libdir stageR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL stageR_1.4.0.zip && rm stageR_1.4.0.tar.gz stageR_1.4.0.zip
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install for i386
* installing *source* package 'stageR' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'stageR'
finding HTML links ... done
adjustedAlphaLevel html
esetProstate html
getAdjustedPValues html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmps334Rn/R.INSTALL1c10150535f4/stageR/man/getAdjustedPValues.Rd:34: missing link 'stageWiseAdjustment,stageR,character,numeric-method'
getAlpha html
getMethod html
getPConfirmation html
getPScreen html
getResults html
getSignificantGenes html
getSignificantTx html
getTx2gene html
hammer.eset html
isAdjusted html
isPScreenAdjusted html
stageR html
stageRClass html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmps334Rn/R.INSTALL1c10150535f4/stageR/man/stageRClass.Rd:19: missing link 'getAdjustedPValues,stageR,logical,logical-method'
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/Rtmps334Rn/R.INSTALL1c10150535f4/stageR/man/stageRClass.Rd:19: missing link 'getResults,stageR-method'
stageRTx html
stageWiseAdjustment html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'stageR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'stageR' as stageR_1.4.0.zip
* DONE (stageR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'stageR' successfully unpacked and MD5 sums checked
In R CMD INSTALL