Ben Bolstad
| Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019) |
| URL: https://git.bioconductor.org/packages/BufferedMatrixMethods |
| Branch: RELEASE_3_8 |
| Last Commit: 2e0a6b2 |
| Last Changed Date: 2018-10-30 11:41:43 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-16 11:48:17 -0400 (Tue, 16 Apr 2019).
| Package 184/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| BufferedMatrixMethods 1.46.0 Ben Bolstad
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: BufferedMatrixMethods |
| Version: 1.46.0 |
| Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL BufferedMatrixMethods |
| StartedAt: 2019-04-15 17:57:53 -0400 (Mon, 15 Apr 2019) |
| EndedAt: 2019-04-15 17:57:57 -0400 (Mon, 15 Apr 2019) |
| EllapsedTime: 4.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL BufferedMatrixMethods
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘BufferedMatrixMethods’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.8-bioc/R/library/BufferedMatrix/include" -I/usr/local/include -fpic -g -O2 -Wall -c init_package.c -o init_package.o
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.8-bioc/R/library/BufferedMatrix/include" -I/usr/local/include -fpic -g -O2 -Wall -c preprocess_bm.c -o preprocess_bm.o
preprocess_bm.c: In function ‘bm_rma_bg_correct’:
preprocess_bm.c:344:7: warning: unused variable ‘i’ [-Wunused-variable]
int i,j;
^
preprocess_bm.c: In function ‘R_bm_rma_bg_correct’:
preprocess_bm.c:378:7: warning: unused variable ‘current_mode’ [-Wunused-variable]
int current_mode;
^
preprocess_bm.c: In function ‘R_bm_quantile_normalize’:
preprocess_bm.c:593:7: warning: unused variable ‘current_mode’ [-Wunused-variable]
int current_mode;
^
preprocess_bm.c: In function ‘do_RMA_buffmat’:
preprocess_bm.c:924:7: warning: variable ‘first_ind’ set but not used [-Wunused-but-set-variable]
int first_ind;
^
preprocess_bm.c: In function ‘R_bm_rma_bg_correct_quantile_normalize’:
preprocess_bm.c:1151:7: warning: unused variable ‘current_mode’ [-Wunused-variable]
int current_mode;
^
preprocess_bm.c: At top level:
preprocess_bm.c:453:12: warning: ‘min’ defined but not used [-Wunused-function]
static int min(int x1,int x2){
^
gcc -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o BufferedMatrixMethods.so init_package.o preprocess_bm.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/BufferedMatrixMethods/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (BufferedMatrixMethods)