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INSTALL report for CAFE on tokay1

This page was generated on 2019-04-13 11:23:37 -0400 (Sat, 13 Apr 2019).

Package 189/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CAFE 1.18.0
Sander Bollen
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/CAFE
Branch: RELEASE_3_8
Last Commit: 06606c5
Last Changed Date: 2018-10-30 11:41:53 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: CAFE
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/CAFE_1.18.0.tar.gz && rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAFE.buildbin-libdir CAFE_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL CAFE_1.18.0.zip && rm CAFE_1.18.0.tar.gz CAFE_1.18.0.zip
StartedAt: 2019-04-12 20:16:25 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:17:49 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 84.7 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/CAFE_1.18.0.tar.gz && rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAFE.buildbin-libdir CAFE_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL CAFE_1.18.0.zip && rm CAFE_1.18.0.tar.gz CAFE_1.18.0.zip
###
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install for i386

* installing *source* package 'CAFE' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CAFE'
    finding HTML links ... done
    CAFE-package                            html  
    CAFE                                    html  
    ProcessCels                             html  
    armStats                                html  
    bandStats                               html  
    chromosomeStats                         html  
    cliSubset                               html  
    discontPlot                             html  
    discontSmooth                           html  
    facetPlot                               html  
    fisher.method                           html  
    guiSubset                               html  
    rawPlot                                 html  
    slidPlot                                html  
    slidSmooth                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'CAFE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CAFE' as CAFE_1.18.0.zip
* DONE (CAFE)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'CAFE' successfully unpacked and MD5 sums checked
In R CMD INSTALL