Back to Multiple platform build/check report for BioC 3.8
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

BUILD BIN report for GEM on tokay1

This page was generated on 2019-04-13 11:26:47 -0400 (Sat, 13 Apr 2019).

Package 586/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GEM 1.8.0
Hong Pan
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/GEM
Branch: RELEASE_3_8
Last Commit: 79d822c
Last Changed Date: 2018-10-30 11:42:01 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GEM
Version: 1.8.0
Command: rm -rf GEM.buildbin-libdir && mkdir GEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEM.buildbin-libdir GEM_1.8.0.tar.gz
StartedAt: 2019-04-13 07:17:31 -0400 (Sat, 13 Apr 2019)
EndedAt: 2019-04-13 07:17:45 -0400 (Sat, 13 Apr 2019)
EllapsedTime: 13.6 seconds
RetCode: 0
Status:  OK  
PackageFile: GEM_1.8.0.zip
PackageFileSize: 583.1 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf GEM.buildbin-libdir && mkdir GEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEM.buildbin-libdir GEM_1.8.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'GEM' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GEM'
    finding HTML links ... done
    GEM-package                             html  
    GEM_Emodel                              html  
    GEM_GUI                                 html  
    GEM_GWASmodel                           html  
    GEM_Gmodel                              html  
    GEM_GxEmodel                            html  
    SlicedData-class                        html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpqALQQo/R.INSTALL34801a317e5e/GEM/man/SlicedData-class.Rd:89: file link 'rowMeans' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpqALQQo/R.INSTALL34801a317e5e/GEM/man/SlicedData-class.Rd:90: file link 'rowSums' in package 'base' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpqALQQo/R.INSTALL34801a317e5e/GEM/man/SlicedData-class.Rd:91: file link 'colMeans' in package 'base' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'GEM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GEM' as GEM_1.8.0.zip
* DONE (GEM)
In R CMD INSTALL
In R CMD INSTALL