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INSTALL report for GenoGAM on malbec1

This page was generated on 2019-04-16 11:51:59 -0400 (Tue, 16 Apr 2019).

Package 617/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenoGAM 2.0.3
Georg Stricker
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/GenoGAM
Branch: RELEASE_3_8
Last Commit: bb9cd4a
Last Changed Date: 2019-03-19 18:01:09 -0400 (Tue, 19 Mar 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64 [ OK ] OK  WARNINGS UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: GenoGAM
Version: 2.0.3
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL GenoGAM
StartedAt: 2019-04-15 18:14:35 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 18:15:34 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 59.2 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL GenoGAM
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* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘GenoGAM’ ...
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include -DARMA_64BIT_WORD=1 -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG -I../inst/include -DARMA_64BIT_WORD=1 -I"/home/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O2 -Wall -c matrixMult.cpp -o matrixMult.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o GenoGAM.so RcppExports.o matrixMult.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.8-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/GenoGAM/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GenoGAM)