Back to Multiple platform build/check report for BioC 3.8 |
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This page was generated on 2019-04-13 11:29:41 -0400 (Sat, 13 Apr 2019).
Package 1451/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
SIMD 1.0.0 Jiadi Zhu
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | NA | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: SIMD |
Version: 1.0.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/SIMD_1.0.0.tar.gz && rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL SIMD_1.0.0.zip && rm SIMD_1.0.0.tar.gz SIMD_1.0.0.zip |
StartedAt: 2019-04-12 18:48:52 -0400 (Fri, 12 Apr 2019) |
EndedAt: 2019-04-12 18:49:12 -0400 (Fri, 12 Apr 2019) |
EllapsedTime: 20.3 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/SIMD_1.0.0.tar.gz && rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL SIMD_1.0.0.zip && rm SIMD_1.0.0.tar.gz SIMD_1.0.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 93674 100 93674 0 0 1526k 0 --:--:-- --:--:-- --:--:-- 1633k install for i386 * installing *source* package 'SIMD' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c init.c -o init.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pvalueclassify.c -o pvalueclassify.o C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/SIMD.buildbin-libdir/SIMD/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SIMD' finding HTML links ... done EM2_H1ESB1_MeDIP_sigleCpG html EM2_H1ESB2_MeDIP_sigleCpG html EM_H1ESB1_MeDIP_sigleCpG html EMalgorithm html EMtest html H1ESB1_MRE_sigleCpG html H1ESB2_MRE_sigleCpG html SIMD-package html all_CpGsite_bin_chr18 html classifypvalue html emalgth html emalgth1 html probBinom html three_mre_cpg html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'SIMD' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c init.c -o init.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pvalueclassify.c -o pvalueclassify.o C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/SIMD.buildbin-libdir/SIMD/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'SIMD' as SIMD_1.0.0.zip * DONE (SIMD) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library' package 'SIMD' successfully unpacked and MD5 sums checked In R CMD INSTALL