Aedin Culhane
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/iBBiG |
| Branch: RELEASE_3_8 |
| Last Commit: 36376ef |
| Last Changed Date: 2018-10-30 11:41:49 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:22:08 -0400 (Sat, 13 Apr 2019).
| Package 745/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| iBBiG 1.26.0 Aedin Culhane
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: iBBiG |
| Version: 1.26.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/iBBiG_1.26.0.tar.gz && rm -rf iBBiG.buildbin-libdir && mkdir iBBiG.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iBBiG.buildbin-libdir iBBiG_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL iBBiG_1.26.0.zip && rm iBBiG_1.26.0.tar.gz iBBiG_1.26.0.zip |
| StartedAt: 2019-04-12 18:50:09 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 18:50:57 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 48.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/iBBiG_1.26.0.tar.gz && rm -rf iBBiG.buildbin-libdir && mkdir iBBiG.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iBBiG.buildbin-libdir iBBiG_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL iBBiG_1.26.0.zip && rm iBBiG_1.26.0.tar.gz iBBiG_1.26.0.zip
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install for i386
* installing *source* package 'iBBiG' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_init_iBBiG.c -o R_init_iBBiG.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c iBBiG.c -o iBBiG.o
iBBiG.c: In function 'clusterCovsC':
iBBiG.c:300:6: warning: implicit declaration of function 'time' [-Wimplicit-function-declaration]
srand((unsigned)time(NULL));
^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o iBBiG.dll tmp.def R_init_iBBiG.o iBBiG.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/iBBiG.buildbin-libdir/iBBiG/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'iBBiG'
finding HTML links ... done
iBBiG-class html
finding level-2 HTML links ... done
iBBiG-package html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpYValxu/R.INSTALL126c47874323/iBBiG/man/iBBiG-package.Rd:44: file link 'biclust' in package 'biclust' does not exist and so has been treated as a topic
iBBiG html
makeArtificial html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'iBBiG' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_init_iBBiG.c -o R_init_iBBiG.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c iBBiG.c -o iBBiG.o
iBBiG.c: In function 'clusterCovsC':
iBBiG.c:300:6: warning: implicit declaration of function 'time' [-Wimplicit-function-declaration]
srand((unsigned)time(NULL));
^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o iBBiG.dll tmp.def R_init_iBBiG.o iBBiG.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/iBBiG.buildbin-libdir/iBBiG/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iBBiG' as iBBiG_1.26.0.zip
* DONE (iBBiG)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'iBBiG' successfully unpacked and MD5 sums checked
In R CMD INSTALL