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INSTALL report for icetea on tokay1

This page was generated on 2019-04-13 11:29:25 -0400 (Sat, 13 Apr 2019).

Package 750/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.0.1
Vivek Bhardwaj
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/icetea
Branch: RELEASE_3_8
Last Commit: b45586e
Last Changed Date: 2019-01-04 13:35:53 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  ERROR 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 

Summary

Package: icetea
Version: 1.0.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/icetea_1.0.1.tar.gz && rm -rf icetea.buildbin-libdir && mkdir icetea.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=icetea.buildbin-libdir icetea_1.0.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL icetea_1.0.1.zip && rm icetea_1.0.1.tar.gz icetea_1.0.1.zip
StartedAt: 2019-04-12 20:21:24 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:23:22 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 117.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/icetea_1.0.1.tar.gz && rm -rf icetea.buildbin-libdir && mkdir icetea.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=icetea.buildbin-libdir icetea_1.0.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL icetea_1.0.1.zip && rm icetea_1.0.1.tar.gz icetea_1.0.1.zip
###
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install for i386

* installing *source* package 'icetea' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'icetea'
    finding HTML links ... done
    ResizeReads                             html  
    activeChrs                              html  
    annotateTSS                             html  
    check_capSet                            html  
    demultiplexFASTQ                        html  
    detectDiffTSS                           html  
    finding level-2 HTML links ... done

    detectTSS                               html  
    exampleCSobject                         html  
    exportTSS                               html  
    filterDuplicates                        html  
    filterDups                              html  
    fitDiffTSS                              html  
    getBamFlags                             html  
    getChromBins                            html  
    getChromWindows                         html  
    getGeneCounts                           html  
    getMCparams                             html  
    getNormFactors                          html  
    get_newfastq                            html  
    getranks                                html  
    mapCaps                                 html  
    newCapSet                               html  
    numReadsInBed                           html  
    plotPrecision                           html  
    plotReadStats                           html  
    plotTSSprecision                        html  
    sampleInfo                              html  
    splitBAM_byIndex                        html  
    splitBAM_byRepindex                     html  
    split_fastq                             html  
    splitranks                              html  
    strandBinCounts                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'icetea' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'icetea' as icetea_1.0.1.zip
* DONE (icetea)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'icetea' successfully unpacked and MD5 sums checked
In R CMD INSTALL