Richard Cotton
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/readat |
| Branch: RELEASE_3_8 |
| Last Commit: a5a144d |
| Last Changed Date: 2018-10-30 11:42:02 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:27:05 -0400 (Sat, 13 Apr 2019).
| Package 1276/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| readat 1.8.0 Richard Cotton
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: readat |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/readat_1.8.0.tar.gz && rm -rf readat.buildbin-libdir && mkdir readat.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=readat.buildbin-libdir readat_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL readat_1.8.0.zip && rm readat_1.8.0.tar.gz readat_1.8.0.zip |
| StartedAt: 2019-04-12 20:26:59 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 20:27:53 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 53.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/readat_1.8.0.tar.gz && rm -rf readat.buildbin-libdir && mkdir readat.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=readat.buildbin-libdir readat_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL readat_1.8.0.zip && rm readat_1.8.0.tar.gz readat_1.8.0.zip
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install for i386
* installing *source* package 'readat' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'readat'
finding HTML links ... done
WideSomaLogicData html
WideSomaLogicDataAttributes html
aptamers html
as.ExpressionSet html
as.SummarizedExperiment html
chromosomalPositions html
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmoB9el/R.INSTALL1d5460913a56/readat/man/chromosomalPositions.Rd:7: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpmoB9el/R.INSTALL1d5460913a56/readat/man/chromosomalPositions.Rd:8: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
colnamesStartWithSeqId html
convertSeqIdToAptamer html
createSampleSubmission html
ensemblIds html
extractSampleData html
getChromosomalPositions html
getEnsemblIds html
getGoMolecularFunctions html
getKeggDefinitions html
getPfam html
getSampleIdVar html
getSequencesWithLargestBetweenGroupVariation
html
getUniProtKeywords html
goMolecularFunction html
isPass html
isSomaEset html
keggDefinitions html
melt.WideSomaLogicData html
orderPlatePosition html
pfam html
readAdat html
readComments html
readControls html
readFirstChar html
readSamples html
readSlides html
readat-defunct html
sub-.WideSomaLogicData html
uniprotKeywords html
writeSampleSubmissionForm html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'readat' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'readat' as readat_1.8.0.zip
* DONE (readat)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'readat' successfully unpacked and MD5 sums checked
In R CMD INSTALL