Christophe Georgescu
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/infercnv |
| Branch: RELEASE_3_9 |
| Last Commit: 5aaa67f |
| Last Changed Date: 2019-09-16 16:39:18 -0400 (Mon, 16 Sep 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:44:18 -0400 (Wed, 16 Oct 2019).
| Package 813/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| infercnv 1.0.4 Christophe Georgescu
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: infercnv |
| Version: 1.0.4 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/infercnv_1.0.4.tar.gz && rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.0.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL infercnv_1.0.4.zip && rm infercnv_1.0.4.tar.gz infercnv_1.0.4.zip |
| StartedAt: 2019-10-15 20:18:20 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:21:56 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 215.8 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/infercnv_1.0.4.tar.gz && rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.0.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL infercnv_1.0.4.zip && rm infercnv_1.0.4.tar.gz infercnv_1.0.4.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 3725k 100 3725k 0 0 36.8M 0 --:--:-- --:--:-- --:--:-- 39.5M
install for i386
* installing *source* package 'infercnv' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'infercnv'
finding HTML links ... done
CreateInfercnvObject html
HMM_states html
MCMC_inferCNV-class html
annots html
apply_median_filtering html
data html
filterHighPNormals html
genes html
inferCNVBayesNet html
infercnv-class html
infercnv-package html
infercnv_obj html
mcmc_obj html
plot_cnv html
run html
validate_infercnv_obj html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'infercnv' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'infercnv' as infercnv_1.0.4.zip
* DONE (infercnv)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'infercnv' successfully unpacked and MD5 sums checked