| Back to Multiple platform build/check report for BioC 3.21: simplified long |
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This page was generated on 2025-03-18 11:44 -0400 (Tue, 18 Mar 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-03-13 r87965) -- "Unsuffered Consequences" | 4537 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-03-01 r87860 ucrt) -- "Unsuffered Consequences" | 4543 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4576 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4528 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4459 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 415/2313 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Tiphaine Martin
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
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To the developers/maintainers of the coMET package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/coMET.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: coMET |
| Version: 1.39.1 |
| Command: rm -rf coMET.buildbin-libdir && mkdir coMET.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh coMET_1.39.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R coMET.buildbin-libdir |
| StartedAt: 2025-03-18 00:54:53 -0400 (Tue, 18 Mar 2025) |
| EndedAt: 2025-03-18 00:56:13 -0400 (Tue, 18 Mar 2025) |
| EllapsedTime: 79.9 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: coMET_1.39.1.tgz |
| PackageFileSize: 21.83 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf coMET.buildbin-libdir && mkdir coMET.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh coMET_1.39.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R coMET.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=coMET.buildbin-libdir coMET_1.39.1.tar.gz' >>>>>>> * installing *source* package ‘coMET’ ... ** this is package ‘coMET’ version ‘1.39.1’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'utils::findMatches' by 'S4Vectors::findMatches' when loading 'coMET' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'utils::findMatches' by 'S4Vectors::findMatches' when loading 'coMET' Warning in fun(libname, pkgname) : Package 'coMET' is deprecated and will be removed from Bioconductor version 3.22 ** testing if installed package can be loaded from final location Warning: replacing previous import 'utils::findMatches' by 'S4Vectors::findMatches' when loading 'coMET' Warning in fun(libname, pkgname) : Package 'coMET' is deprecated and will be removed from Bioconductor version 3.22 ** testing if installed package keeps a record of temporary installation path * DONE (coMET)