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This page was generated on 2026-02-13 11:32 -0500 (Fri, 13 Feb 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" 4863
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Package 722/2352HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
famat 1.21.3  (landing page)
Mathieu Charles
Snapshot Date: 2026-02-12 13:40 -0500 (Thu, 12 Feb 2026)
git_url: https://git.bioconductor.org/packages/famat
git_branch: devel
git_last_commit: 5d8a814
git_last_commit_date: 2026-01-26 10:14:05 -0500 (Mon, 26 Jan 2026)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR    ERROR  skipped
See other builds for famat in R Universe.

INSTALL results for famat on nebbiolo1

To the developers/maintainers of the famat package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/famat.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: famat
Version: 1.21.3
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL famat
StartedAt: 2026-02-12 15:54:46 -0500 (Thu, 12 Feb 2026)
EndedAt: 2026-02-12 15:54:47 -0500 (Thu, 12 Feb 2026)
EllapsedTime: 1.2 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL famat
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* installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’
* installing *source* package ‘famat’ ...
** this is package ‘famat’ version ‘1.21.3’
** using staged installation
** R
Error in parse(...) : 
  /home/biocbuild/bbs-3.23-bioc/meat/famat/R/interactions.R:144:1: unexpected '>'
143: #    all_compounds_chebi <- read.csv("data/all_compounds_chebi.csv")
144: >
     ^
ERROR: unable to collate and parse R files for package ‘famat’
* removing ‘/home/biocbuild/bbs-3.23-bioc/R/site-library/famat’
* restoring previous ‘/home/biocbuild/bbs-3.23-bioc/R/site-library/famat’