##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD check --install=check:ngsReports.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings ngsReports_2.13.1.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/ngsReports.Rcheck’
* using R Under development (unstable) (2025-02-19 r87757)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ngsReports/DESCRIPTION’ ... OK
* this is package ‘ngsReports’ version ‘2.13.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘ngsReports’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
plotSeqContent-methods 5.131  0.063   5.206
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
   6.       └─plotly:::ggplotly.ggplot(x, tooltip = hv)
   7.         └─plotly::gg2list(...)
  ── Error ('test-renderDendro.R:11:1'): (code run outside of `test_that()`) ─────
  <subscriptOutOfBoundsError/error/condition>
  Error in `pm[[2]]`: subscript out of bounds
  Backtrace:
      ▆
   1. └─ngsReports:::.renderDendro(dx$segments) at test-renderDendro.R:11:1
   2.   ├─plotly::ggplotly(dendro, tooltip = NULL)
   3.   └─plotly:::ggplotly.ggplot(dendro, tooltip = NULL)
   4.     └─plotly::gg2list(...)
  
  [ FAIL 24 | WARN 0 | SKIP 0 | PASS 295 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.23-bioc/meat/ngsReports.Rcheck/00check.log’
for details.

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD INSTALL ngsReports
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-devel_2025-02-19/site-library’
* installing *source* package ‘ngsReports’ ...
** this is package ‘ngsReports’ version ‘2.13.1’
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ngsReports)

R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(ngsReports)
Loading required package: BiocGenerics
Loading required package: generics

Attaching package: 'generics'

The following objects are masked from 'package:base':

    as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
    setequal, union


Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
    mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
    rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
    unsplit, which.max, which.min

Loading required package: ggplot2
Loading required package: patchwork
Loading required package: tibble
> 
> test_check("ngsReports")
[ FAIL 24 | WARN 0 | SKIP 0 | PASS 295 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-allPlots.R:5:3'): plotOverrep outputs correct objects ──────────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotOverrep(fdl[[1]], TRUE) at test-allPlots.R:5:3
  2. └─ngsReports::plotOverrep(fdl[[1]], TRUE)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, pwfCols, ...)
  4.     ├─base::suppressMessages(suppressWarnings(plotly::ggplotly(p)))
  5.     │ └─base::withCallingHandlers(...)
  6.     ├─base::suppressWarnings(plotly::ggplotly(p))
  7.     │ └─base::withCallingHandlers(...)
  8.     ├─plotly::ggplotly(p)
  9.     └─plotly:::ggplotly.ggplot(p)
 10.       └─plotly::gg2list(...)
── Error ('test-allPlots.R:38:3'): plotSeqLengthDistn outputs correct objects ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotSeqLengthDistn(fdl[[1]], TRUE) at test-allPlots.R:38:3
 2. └─ngsReports::plotSeqLengthDistn(fdl[[1]], TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─base::suppressMessages(plotly::ggplotly(p, tooltip = c("x", "y")))
 5.     │ └─base::withCallingHandlers(...)
 6.     ├─plotly::ggplotly(p, tooltip = c("x", "y"))
 7.     └─plotly:::ggplotly.ggplot(p, tooltip = c("x", "y"))
 8.       └─plotly::gg2list(...)
── Error ('test-allPlots.R:72:3'): plotSeqQuals outputs correct objects ────────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotSeqQuals(fdl[[1]], TRUE) at test-allPlots.R:72:3
  2. └─ngsReports::plotSeqQuals(fdl[[1]], TRUE)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, pwfCols, ...)
  4.     ├─base::suppressMessages(suppressWarnings(plotly::ggplotly(p, hoverinfo = hv)))
  5.     │ └─base::withCallingHandlers(...)
  6.     ├─base::suppressWarnings(plotly::ggplotly(p, hoverinfo = hv))
  7.     │ └─base::withCallingHandlers(...)
  8.     ├─plotly::ggplotly(p, hoverinfo = hv)
  9.     └─plotly:::ggplotly.ggplot(p, hoverinfo = hv)
 10.       └─plotly::gg2list(...)
── Error ('test-makeSidebar.R:5:1'): (code run outside of `test_that()`) ───────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. └─ngsReports:::.makeSidebar(status, key, pwf) at test-makeSidebar.R:5:1
 2.   ├─base::suppressWarnings(...)
 3.   │ └─base::withCallingHandlers(...)
 4.   ├─base::suppressMessages(...)
 5.   │ └─base::withCallingHandlers(...)
 6.   ├─plotly::ggplotly(sideBar, tooltip = c("y", "fill"))
 7.   └─plotly:::ggplotly.ggplot(sideBar, tooltip = c("y", "fill"))
 8.     └─plotly::gg2list(...)
── Error ('test-plotAdapterContent.R:7:3'): plotAdapterContent outputs correct object classes ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotAdapterContent(fdl[[1]], TRUE) at test-plotAdapterContent.R:7:3
  2. └─ngsReports::plotAdapterContent(fdl[[1]], TRUE)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
  4.     ├─base::suppressWarnings(suppressMessages(plotly::ggplotly(p)))
  5.     │ └─base::withCallingHandlers(...)
  6.     ├─base::suppressMessages(plotly::ggplotly(p))
  7.     │ └─base::withCallingHandlers(...)
  8.     ├─plotly::ggplotly(p)
  9.     └─plotly:::ggplotly.ggplot(p)
 10.       └─plotly::gg2list(...)
── Error ('test-plotAdapterContent.R:34:3'): FastpData plots correctly ─────────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotAdapterContent(fp, TRUE) at test-plotAdapterContent.R:34:3
 2. └─ngsReports::plotAdapterContent(fp, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─base::suppressMessages(plotly::ggplotly(p, tooltip = hv))
 5.     │ └─base::withCallingHandlers(...)
 6.     ├─plotly::ggplotly(p, tooltip = hv)
 7.     └─plotly:::ggplotly.ggplot(p, tooltip = hv)
 8.       └─plotly::gg2list(...)
── Error ('test-plotAdapterContent.R:47:3'): FastpDataList plots correctly ─────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotAdapterContent(...) at test-plotAdapterContent.R:47:3
  2. └─ngsReports::plotAdapterContent(...)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
  4.     └─ngsReports:::.prepHeatmap(...)
  5.       └─ngsReports:::.makeSidebar(...)
  6.         ├─base::suppressWarnings(...)
  7.         │ └─base::withCallingHandlers(...)
  8.         ├─base::suppressMessages(...)
  9.         │ └─base::withCallingHandlers(...)
 10.         ├─plotly::ggplotly(sideBar, tooltip = c("y", "fill"))
 11.         └─plotly:::ggplotly.ggplot(sideBar, tooltip = c("y", "fill"))
 12.           └─plotly::gg2list(...)
── Error ('test-plotBaseQuals.R:7:3'): plotBaseQuals (FastQC) outputs correct objects ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotBaseQuals(fdl[[1]], TRUE) at test-plotBaseQuals.R:7:3
  2. └─ngsReports::plotBaseQuals(fdl[[1]], TRUE)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
  4.     ├─base::suppressMessages(suppressWarnings(plotly::ggplotly(p, tooltip = hv)))
  5.     │ └─base::withCallingHandlers(...)
  6.     ├─base::suppressWarnings(plotly::ggplotly(p, tooltip = hv))
  7.     │ └─base::withCallingHandlers(...)
  8.     ├─plotly::ggplotly(p, tooltip = hv)
  9.     └─plotly:::ggplotly.ggplot(p, tooltip = hv)
 10.       └─plotly::gg2list(...)
── Error ('test-plotBaseQuals.R:30:3'): plotBaseQuals (Fastp) output correct objects ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotBaseQuals(fp, TRUE) at test-plotBaseQuals.R:30:3
  2. └─ngsReports::plotBaseQuals(fp, TRUE)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
  4.     ├─base::suppressMessages(suppressWarnings(plotly::ggplotly(p, tooltip = tt)))
  5.     │ └─base::withCallingHandlers(...)
  6.     ├─base::suppressWarnings(plotly::ggplotly(p, tooltip = tt))
  7.     │ └─base::withCallingHandlers(...)
  8.     ├─plotly::ggplotly(p, tooltip = tt)
  9.     └─plotly:::ggplotly.ggplot(p, tooltip = tt)
 10.       └─plotly::gg2list(...)
── Error ('test-plotDupLevels.R:6:3'): plotDupLevels outputs correct objects from FastQC ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotDupLevels(fdl[[1]], TRUE) at test-plotDupLevels.R:6:3
 2. └─ngsReports::plotDupLevels(fdl[[1]], TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─base::suppressMessages(plotly::ggplotly(p, tooltip = tt))
 5.     │ └─base::withCallingHandlers(...)
 6.     ├─plotly::ggplotly(p, tooltip = tt)
 7.     └─plotly:::ggplotly.ggplot(p, tooltip = tt)
 8.       └─plotly::gg2list(...)
── Error ('test-plotDupLevels.R:28:3'): plotDupLevels fastp outputs are correct ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotDupLevels(fp, TRUE) at test-plotDupLevels.R:28:3
 2. └─ngsReports::plotDupLevels(fp, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p, tooltip = tt)
 5.     └─plotly:::ggplotly.ggplot(p, tooltip = tt)
 6.       └─plotly::gg2list(...)
── Error ('test-plotGcContent.R:7:3'): plotGcContent outputs correct objects ───
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotGcContent(fdl[[1]], usePlotly = TRUE) at test-plotGcContent.R:7:3
  2. └─ngsReports::plotGcContent(fdl[[1]], usePlotly = TRUE)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
  4.     ├─base::suppressWarnings(suppressMessages(plotly::ggplotly(p, tooltip = ttip)))
  5.     │ └─base::withCallingHandlers(...)
  6.     ├─base::suppressMessages(plotly::ggplotly(p, tooltip = ttip))
  7.     │ └─base::withCallingHandlers(...)
  8.     ├─plotly::ggplotly(p, tooltip = ttip)
  9.     └─plotly:::ggplotly.ggplot(p, tooltip = ttip)
 10.       └─plotly::gg2list(...)
── Error ('test-plotGcContent.R:40:3'): plotGcContent works for Fastp structures ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotGcContent(fpl[[1]], usePlotly = TRUE) at test-plotGcContent.R:40:3
 2. └─ngsReports::plotGcContent(fpl[[1]], usePlotly = TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p, tooltip = hv)
 5.     └─plotly:::ggplotly.ggplot(p, tooltip = hv)
 6.       └─plotly::gg2list(...)
── Error ('test-plotInsertSize.R:7:3'): Basic FastpData Plots work ─────────────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotInsertSize(fp, TRUE) at test-plotInsertSize.R:7:3
 2. └─ngsReports::plotInsertSize(fp, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p, tooltip = tt)
 5.     └─plotly:::ggplotly.ggplot(p, tooltip = tt)
 6.       └─plotly::gg2list(...)
── Error ('test-plotInsertSize.R:25:3'): Basic FastpDataList Plots work ────────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotInsertSize(fp, TRUE) at test-plotInsertSize.R:25:3
 2. └─ngsReports::plotInsertSize(fp, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p, tooltip = tt)
 5.     └─plotly:::ggplotly.ggplot(p, tooltip = tt)
 6.       └─plotly::gg2list(...)
── Error ('test-plotKmers.R:6:3'): plotKmers outputs correct objects ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotKmers(fdl[[1]], TRUE) at test-plotKmers.R:6:3
 2. └─ngsReports::plotKmers(fdl[[1]], TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p)
 5.     └─plotly:::ggplotly.ggplot(p)
 6.       └─plotly::gg2list(...)
── Error ('test-plotKmers.R:25:3'): FastpData objects plot correctly ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotKmers(fp, TRUE) at test-plotKmers.R:25:3
 2. └─ngsReports::plotKmers(fp, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─base::suppressWarnings(plotly::ggplotly(p, tooltip = hv))
 5.     │ └─base::withCallingHandlers(...)
 6.     ├─plotly::ggplotly(p, tooltip = hv)
 7.     └─plotly:::ggplotly.ggplot(p, tooltip = hv)
 8.       └─plotly::gg2list(...)
── Error ('test-plotNContent.R:19:3'): plotNContent works for all variations of FastpData params ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotNContent(fp, TRUE) at test-plotNContent.R:19:3
 2. └─ngsReports::plotNContent(fp, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─base::suppressWarnings(plotly::ggplotly(p, tooltip = hv))
 5.     │ └─base::withCallingHandlers(...)
 6.     ├─plotly::ggplotly(p, tooltip = hv)
 7.     └─plotly:::ggplotly.ggplot(p, tooltip = hv)
 8.       └─plotly::gg2list(...)
── Error ('test-plotReadTotals.R:7:3'): plotReadTotals works for FastQC objects ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
     ▆
  1. ├─ngsReports::plotReadTotals(fdl, usePlotly = TRUE) at test-plotReadTotals.R:7:3
  2. └─ngsReports::plotReadTotals(fdl, usePlotly = TRUE)
  3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
  4.     ├─base::suppressMessages(suppressWarnings(plotly::ggplotly(p)))
  5.     │ └─base::withCallingHandlers(...)
  6.     ├─base::suppressWarnings(plotly::ggplotly(p))
  7.     │ └─base::withCallingHandlers(...)
  8.     ├─plotly::ggplotly(p)
  9.     └─plotly:::ggplotly.ggplot(p)
 10.       └─plotly::gg2list(...)
── Error ('test-plotReadTotals.R:16:3'): plotReadtTotals works for Fastp objects ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotReadTotals(fpl, usePlotly = TRUE) at test-plotReadTotals.R:16:3
 2. └─ngsReports::plotReadTotals(fpl, usePlotly = TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p, tooltip = tt)
 5.     └─plotly:::ggplotly.ggplot(p, tooltip = tt)
 6.       └─plotly::gg2list(...)
── Error ('test-plotSeqContent.R:6:3'): plotSeqContent outputs correct objects ──
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotSeqContent(fdl[[1]], TRUE) at test-plotSeqContent.R:6:3
 2. └─ngsReports::plotSeqContent(fdl[[1]], TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p, tooltip = ttip)
 5.     └─plotly:::ggplotly.ggplot(p, tooltip = ttip)
 6.       └─plotly::gg2list(...)
── Error ('test-plotSeqContent.R:29:3'): plotSeqContent(FastpData) works ───────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotSeqContent(fp, TRUE) at test-plotSeqContent.R:29:3
 2. └─ngsReports::plotSeqContent(fp, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     ├─plotly::ggplotly(p, tooltip = tt)
 5.     └─plotly:::ggplotly.ggplot(p, tooltip = tt)
 6.       └─plotly::gg2list(...)
── Error ('test-plotSeqContent.R:42:3'): plotSeqContent(FastpDataList) works ───
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. ├─ngsReports::plotSeqContent(fpl, TRUE) at test-plotSeqContent.R:42:3
 2. └─ngsReports::plotSeqContent(fpl, TRUE)
 3.   └─ngsReports (local) .local(x, usePlotly, labels, pattern, ...)
 4.     └─ngsReports:::.prepHeatmap(...)
 5.       ├─plotly::ggplotly(x, tooltip = hv)
 6.       └─plotly:::ggplotly.ggplot(x, tooltip = hv)
 7.         └─plotly::gg2list(...)
── Error ('test-renderDendro.R:11:1'): (code run outside of `test_that()`) ─────
<subscriptOutOfBoundsError/error/condition>
Error in `pm[[2]]`: subscript out of bounds
Backtrace:
    ▆
 1. └─ngsReports:::.renderDendro(dx$segments) at test-renderDendro.R:11:1
 2.   ├─plotly::ggplotly(dendro, tooltip = NULL)
 3.   └─plotly:::ggplotly.ggplot(dendro, tooltip = NULL)
 4.     └─plotly::gg2list(...)

[ FAIL 24 | WARN 0 | SKIP 0 | PASS 295 ]
Error: Test failures
Execution halted