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This page was generated on 2025-03-22 12:13 -0400 (Sat, 22 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 869
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Package 98/217HostnameOS / ArchINSTALLBUILDCHECK
GEOquery 2.75.0  (landing page)
Sean Davis
Snapshot Date: 2025-03-22 12:00 -0400 (Sat, 22 Mar 2025)
git_url: https://git.bioconductor.org/packages/GEOquery
git_branch: devel
git_last_commit: 2a416df
git_last_commit_date: 2024-10-29 09:25:37 -0400 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for GEOquery on teran2

To the developers/maintainers of the GEOquery package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GEOquery
Version: 2.75.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GEOquery
StartedAt: 2025-03-22 12:09:58 -0400 (Sat, 22 Mar 2025)
EndedAt: 2025-03-22 12:10:00 -0400 (Sat, 22 Mar 2025)
EllapsedTime: 1.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GEOquery
###
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* checking for file ‘GEOquery/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/R/getGEOfile.R': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/R/getGSEDataTables.R': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/R/parseGEO.R': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/R/rnaseq.R': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/R/searchGEO.R': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/R/zzz.R': No space left on device
cp: cannot create directory '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/inst': No space left on device
cp: cannot create directory '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/man': No space left on device
cp: cannot create directory '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/tests': No space left on device
cp: cannot create directory '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/vignettes': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/.Rbuildignore': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/.gitignore': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/.lintr': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/CODE_OF_CONDUCT.md': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/Dockerfile': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/GEOquery.Rproj': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/LICENSE': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/LICENSE.md': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/NAMESPACE': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/NEWS.md': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/README.md': No space left on device
cp: error writing '/tmp/RtmpQMphfD/Rbuild104f7b548367d4/GEOquery/_pkgdown.yml': No space left on device
 ERROR
copying to build directory failed