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This page was generated on 2025-03-20 13:54 -0400 (Thu, 20 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 869
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Package 184/217HostnameOS / ArchINSTALLBUILDCHECK
scater 1.35.4  (landing page)
Alan O'Callaghan
Snapshot Date: 2025-03-20 12:00 -0400 (Thu, 20 Mar 2025)
git_url: https://git.bioconductor.org/packages/scater
git_branch: devel
git_last_commit: 68425da
git_last_commit_date: 2025-03-07 06:28:00 -0400 (Fri, 07 Mar 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for scater on teran2

To the developers/maintainers of the scater package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: scater
Version: 1.35.4
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data scater
StartedAt: 2025-03-20 12:51:02 -0400 (Thu, 20 Mar 2025)
EndedAt: 2025-03-20 12:52:55 -0400 (Thu, 20 Mar 2025)
EllapsedTime: 112.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data scater
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* checking for file ‘scater/DESCRIPTION’ ... OK
* preparing ‘scater’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘overview.Rmd’ using rmarkdown
pandoc: /tmp/RtmpkauWe5/Rbuildde6cf4c2395c7/scater/vignettes/overview.html: hClose: resource exhausted (No space left on device)
Error: processing vignette 'overview.Rmd' failed with diagnostics:
pandoc document conversion failed with error 1
--- failed re-building ‘overview.Rmd’

SUMMARY: processing the following file failed:
  ‘overview.Rmd’

Error: Vignette re-building failed.
Execution halted