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This page was generated on 2025-03-23 12:12 -0400 (Sun, 23 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 869
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Package 51/217HostnameOS / ArchINSTALLBUILDCHECK
clusterProfiler 4.15.1  (landing page)
Guangchuang Yu
Snapshot Date: 2025-03-23 12:00 -0400 (Sun, 23 Mar 2025)
git_url: https://git.bioconductor.org/packages/clusterProfiler
git_branch: devel
git_last_commit: 1aedd90
git_last_commit_date: 2024-11-29 09:35:31 -0400 (Fri, 29 Nov 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped

BUILD results for clusterProfiler on teran2

To the developers/maintainers of the clusterProfiler package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: clusterProfiler
Version: 4.15.1
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data clusterProfiler
StartedAt: 2025-03-23 12:10:04 -0400 (Sun, 23 Mar 2025)
EndedAt: 2025-03-23 12:10:04 -0400 (Sun, 23 Mar 2025)
EllapsedTime: 0.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data clusterProfiler
###
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##############################################################################


* checking for file ‘clusterProfiler/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/simplify.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/00-AllClasses.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/AllGenerics.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/DOSE.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/GFFparser.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/accessor.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/bitr.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/clusterProfiler-package.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/compareCluster.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/data.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-arrange.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-filter.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-group_by.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-mutate.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-rename.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-select.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-slice.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/dplyr-summarise.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/enrichGO.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/enrichKEGG.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/enrichMKEGG.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/enricher.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/enrichplot.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/go-utilities.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/gofilter.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/groupGO.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/gseAnalyzer.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/gson.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/kegg-utilities.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/pathwayCommons.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/plotGOgraph.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/ppi.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/reexports.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/taxa.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/uniprot.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/utilities.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/wikiPathways.R': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/R/zzz.R': No space left on device
cp: cannot create directory '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/data': No space left on device
cp: cannot create directory '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/docs': No space left on device
cp: cannot create directory '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/inst': No space left on device
cp: cannot create directory '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/man': No space left on device
cp: cannot create directory '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/outdated': No space left on device
cp: cannot create directory '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/tests': No space left on device
cp: cannot create directory '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/vignettes': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/.Rbuildignore': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/.gitignore': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/.svnignore': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/.travis.yml': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/CONTRIBUTING.md': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/NEWS': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/appveyor.yml': No space left on device
cp: error writing '/tmp/RtmpuGzmnY/Rbuild1c0826a67f5ee/clusterProfiler/graphic-abstract-The-Innovation-2021.jpg': No space left on device
 ERROR
copying to build directory failed