Lihua Julie Zhu
| Snapshot Date: 2026-05-08 13:45 -0400 (Fri, 08 May 2026) |
| git_url: https://git.bioconductor.org/packages/GUIDEseq |
| git_branch: devel |
| git_last_commit: 8a222ef |
| git_last_commit_date: 2026-04-28 08:42:02 -0400 (Tue, 28 Apr 2026) |
| Back to Build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-05-09 15:11 -0400 (Sat, 09 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4890 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 955/2374 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BIOCCHECK | BUILD BIN | ||||||||
| GUIDEseq 1.43.0 (landing page) Lihua Julie Zhu
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | ERRORS | | ||||||||
| See other builds for GUIDEseq in R Universe. | |||||||||||||||
|
To the developers/maintainers of the GUIDEseq package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GUIDEseq.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: GUIDEseq |
| Version: 1.43.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/Rscript -e "BiocCheck::BiocCheck('GUIDEseq_1.43.0.tar.gz','quit-with-status'=TRUE)" |
| StartedAt: 2026-05-09 06:56:23 -0400 (Sat, 09 May 2026) |
| EndedAt: 2026-05-09 06:57:24 -0400 (Sat, 09 May 2026) |
| EllapsedTime: 61.1 seconds |
| RetCode: 1 |
| Status: ERRORS |
| CheckDir: None |
| Warnings: NA |
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### Running command:
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### /home/biocbuild/bbs-3.24-bioc/R/bin/Rscript -e "BiocCheck::BiocCheck('GUIDEseq_1.43.0.tar.gz','quit-with-status'=TRUE)"
###
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── Installing GUIDEseq ─────────────────────────────────────────────────────────
✔ Package installed successfully
── GUIDEseq session metadata ───────────────────────────────────────────────────
→ sourceDir: /tmp/RtmpOshebW/fileadf0737e817ff/GUIDEseq
→ BiocVersion: 3.24
→ Package: GUIDEseq
→ PackageVersion: 1.43.0
→ BiocCheckDir: /home/biocbuild/bbs-3.24-bioc/meat/GUIDEseq.BiocCheck
→ BiocCheckVersion: 1.49.4
→ sourceDir: /tmp/RtmpOshebW/fileadf0737e817ff/GUIDEseq
→ installDir: /tmp/RtmpOshebW/fileadf073a435692
→ isTarBall: TRUE
→ platform: unix
── Running BiocCheck on GUIDEseq ───────────────────────────────────────────────
* Checking for deprecated package usage...
* Checking for remote package usage...
* Checking for 'LazyData: true' usage...
* Checking version number...
* Checking for version number mismatch...
* Checking version number validity...
* Checking R version dependency...
ℹ NOTE: Update R version dependency from 3.5.0 to 4.6.0
* Checking package size...
* Checking individual file sizes...
* Checking biocViews...
* Checking that biocViews are present...
* Checking package type based on biocViews...
→ Software
* Checking for non-trivial biocViews...
* Checking that biocViews come from the same category...
* Checking biocViews validity...
* Checking for recommended biocViews...
ℹ NOTE: Consider adding these automatically suggested biocViews: Coverage,
Alignment, BiocViews
ℹ Search 'biocViews' at https://contributions.bioconductor.org
* Checking build system compatibility...
* Checking for proper Description: field...
* Checking if DESCRIPTION is well formatted...
* Checking for whitespace in DESCRIPTION field names...
* Checking if 'Package:' field matches directory / tarball...
* Checking for Version: field...
✖ ERROR: Remove Maintainer field. Use Authors@R [cre] designation.
* Checking License: for restrictive use...
* Checking for recommended DESCRIPTION fields...
ℹ NOTE: Provide 'URL', 'BugReports' field(s) in DESCRIPTION
* Checking for Bioconductor software dependencies...
ℹ Bioconductor dependencies found in Imports & Depends (50%).
* Checking for pinned package versions in DESCRIPTION...
* Checking for 'fnd' role in Authors@R...
ℹ NOTE: No 'fnd' role found in Authors@R. If the work is supported by a grant,
consider adding the 'fnd' role to the list of authors.
* Checking NAMESPACE...
* Checking .Rbuildignore...
* Checking for stray BiocCheck output folders...
* Checking vignette directory...
! WARNING: Use RMarkdown instead of Sweave 'Rnw' vignettes.
Rnw vignette(s) found:
• GUIDEseq.Rnw
ℹ NOTE: Vignette(s) found with missing chunk labels
Found in files:
• GUIDEseq.Rnw
Error: ‘GUIDEseq.Rnw’ is not ASCII and does not declare an encoding
Execution halted