| Back to Build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-05-09 15:11 -0400 (Sat, 09 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4890 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1419/2374 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BIOCCHECK | BUILD BIN | ||||||||
| MultiBaC 1.23.0 (landing page) The package maintainer
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | ERRORS | |||||||||
| See other builds for MultiBaC in R Universe. | |||||||||||||||
|
To the developers/maintainers of the MultiBaC package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MultiBaC.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MultiBaC |
| Version: 1.23.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:MultiBaC.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings MultiBaC_1.23.0.tar.gz |
| StartedAt: 2026-05-09 02:17:18 -0400 (Sat, 09 May 2026) |
| EndedAt: 2026-05-09 02:20:28 -0400 (Sat, 09 May 2026) |
| EllapsedTime: 190.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MultiBaC.Rcheck |
| Warnings: 0 |
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### Running command:
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### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:MultiBaC.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings MultiBaC_1.23.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/MultiBaC.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-09 06:17:18 UTC
* checking for file ‘MultiBaC/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MultiBaC’ version ‘1.23.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MultiBaC’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
MultiBaC 11.773 0.204 11.977
batchCorrection 11.280 0.266 11.547
Q2_plot 11.003 0.129 11.133
explained_varPlot 10.898 0.082 10.982
inner_relPlot 10.866 0.107 10.974
plot 10.764 0.036 10.800
plot_pca 10.647 0.066 10.715
ARSyNbac 9.475 0.419 9.894
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: OK
MultiBaC.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL MultiBaC ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’ * installing *source* package ‘MultiBaC’ ... ** this is package ‘MultiBaC’ version ‘1.23.0’ ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultiBaC)
MultiBaC.Rcheck/MultiBaC-Ex.timings
| name | user | system | elapsed | |
| ARSyNbac | 9.475 | 0.419 | 9.894 | |
| MultiBaC | 11.773 | 0.204 | 11.977 | |
| Q2_plot | 11.003 | 0.129 | 11.133 | |
| batchCorrection | 11.280 | 0.266 | 11.547 | |
| batchEstPlot | 1.103 | 0.036 | 1.141 | |
| createMbac | 0.348 | 0.000 | 0.348 | |
| explained_varPlot | 10.898 | 0.082 | 10.982 | |
| genMissingOmics | 0.837 | 0.002 | 0.839 | |
| genModelList | 0.388 | 0.000 | 0.388 | |
| inner_relPlot | 10.866 | 0.107 | 10.974 | |
| multiyeast | 0.002 | 0.000 | 0.002 | |
| plot | 10.764 | 0.036 | 10.800 | |
| plot_pca | 10.647 | 0.066 | 10.715 | |
| summary | 0.310 | 0.001 | 0.311 | |