Britta Velten
| Snapshot Date: 2026-05-08 13:45 -0400 (Fri, 08 May 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: ba611e2 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-05-09 15:11 -0400 (Sat, 09 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4890 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 930/2374 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BIOCCHECK | BUILD BIN | ||||||||
| graper 1.29.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | WARNINGS | | ||||||||
| See other builds for graper in R Universe. | |||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.29.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz |
| StartedAt: 2026-05-09 00:27:07 -0400 (Sat, 09 May 2026) |
| EndedAt: 2026-05-09 00:28:39 -0400 (Sat, 09 May 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-09 04:27:07 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.29.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
installed size is 6.2Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.29.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.24-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.24-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.24-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.24-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.933
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-550.429
ELB improved by 319.504
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.463
ELB improved by 60.9662
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.91
ELB improved by 28.5523
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.075
ELB improved by 10.8351
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.419
ELB improved by 5.65634
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.986
ELB improved by 4.43273
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.809
ELB improved by 4.17744
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.603
ELB improved by 4.20614
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.38
ELB improved by 4.22217
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.376
ELB improved by 4.00422
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.922
ELB improved by 3.45386
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.241
ELB improved by 2.68117
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.312
ELB improved by 1.92955
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.937
ELB improved by 1.37419
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.911
ELB improved by 1.02654
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.117
ELB improved by 0.794164
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.52
ELB improved by 0.597103
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.093
ELB improved by 0.426426
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.793
ELB improved by 0.299942
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.575
ELB improved by 0.218478
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.407
ELB improved by 0.168247
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.271
ELB improved by 0.136028
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.157
ELB improved by 0.11395
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.059
ELB improved by 0.0978677
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.973
ELB improved by 0.0855506
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.897
ELB improved by 0.0757345
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.83
ELB improved by 0.0676714
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.769
ELB improved by 0.0608992
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.714
ELB improved by 0.0551185
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.664
ELB improved by 0.0501251
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.618
ELB improved by 0.0457732
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.576
ELB improved by 0.0419543
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.537
ELB improved by 0.038585
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.502
ELB improved by 0.0355996
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.469
ELB improved by 0.0329457
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.438
ELB improved by 0.0305805
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.41
ELB improved by 0.0284693
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.383
ELB improved by 0.0265834
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.358
ELB improved by 0.0248994
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.335
ELB improved by 0.0233983
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.313
ELB improved by 0.0220645
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.292
ELB improved by 0.0208861
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.272
ELB improved by 0.0198539
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.253
ELB improved by 0.0189614
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.235
ELB improved by 0.0182044
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.217
ELB improved by 0.0175803
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.2
ELB improved by 0.0170878
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.183
ELB improved by 0.0167252
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.167
ELB improved by 0.0164885
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.151
ELB improved by 0.0163683
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.134
ELB improved by 0.016346
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.118
ELB improved by 0.0163885
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.101
ELB improved by 0.0164456
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.085
ELB improved by 0.0164496
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.069
ELB improved by 0.0163229
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.053
ELB improved by 0.0159938
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.037
ELB improved by 0.0154173
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.023
ELB improved by 0.0145924
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.009
ELB improved by 0.0135655
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.997
ELB improved by 0.0124169
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.985
ELB improved by 0.0112362
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.975
ELB improved by 0.0101001
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.966
ELB improved by 0.00906
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.759
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-587.302
ELB improved by 279.457
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.791
ELB improved by 61.5105
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.648
ELB improved by 44.1434
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.59
ELB improved by 20.0582
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.295
ELB improved by 7.29468
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.139
ELB improved by 4.1559
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.75
ELB improved by 3.38923
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.602
ELB improved by 3.14768
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.558
ELB improved by 3.04401
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.607
ELB improved by 2.95108
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.794
ELB improved by 2.81278
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.204
ELB improved by 2.59031
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.933
ELB improved by 2.27092
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.044
ELB improved by 1.88896
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.537
ELB improved by 1.50717
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.374
ELB improved by 1.1631
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.511
ELB improved by 0.863279
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.893
ELB improved by 0.617997
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.453
ELB improved by 0.439199
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.131
ELB improved by 0.322042
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.882
ELB improved by 0.248887
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.68
ELB improved by 0.202444
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.509
ELB improved by 0.171228
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.36
ELB improved by 0.148776
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.228
ELB improved by 0.131644
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.11
ELB improved by 0.117979
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.004
ELB improved by 0.106742
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.906
ELB improved by 0.0973174
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.817
ELB improved by 0.0893116
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.735
ELB improved by 0.0824594
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.658
ELB improved by 0.0765706
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.586
ELB improved by 0.071503
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.519
ELB improved by 0.0671469
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.456
ELB improved by 0.0634157
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.396
ELB improved by 0.0602404
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.338
ELB improved by 0.0575655
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.283
ELB improved by 0.0553461
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.229
ELB improved by 0.0535463
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.177
ELB improved by 0.0521369
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.126
ELB improved by 0.0510943
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.076
ELB improved by 0.0503989
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.026
ELB improved by 0.0500337
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.976
ELB improved by 0.0499832
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.925
ELB improved by 0.0502315
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.875
ELB improved by 0.0507608
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.823
ELB improved by 0.05155
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.77
ELB improved by 0.0525728
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.717
ELB improved by 0.0537964
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.661
ELB improved by 0.0551805
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.605
ELB improved by 0.0566764
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.547
ELB improved by 0.0582272
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.487
ELB improved by 0.0597685
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.426
ELB improved by 0.0612304
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.363
ELB improved by 0.0625398
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.299
ELB improved by 0.0636244
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.235
ELB improved by 0.0644171
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.17
ELB improved by 0.0648608
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.105
ELB improved by 0.0649132
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.041
ELB improved by 0.0645509
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.977
ELB improved by 0.0637715
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.914
ELB improved by 0.0625944
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.853
ELB improved by 0.061059
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.794
ELB improved by 0.0592211
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.737
ELB improved by 0.0571479
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.682
ELB improved by 0.0549125
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.629
ELB improved by 0.0525884
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.579
ELB improved by 0.0502449
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.531
ELB improved by 0.047944
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.485
ELB improved by 0.0457385
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.442
ELB improved by 0.0436712
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.4
ELB improved by 0.0417758
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.36
ELB improved by 0.0400784
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.321
ELB improved by 0.0385989
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.284
ELB improved by 0.0373542
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.248
ELB improved by 0.0363595
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.212
ELB improved by 0.0356311
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.177
ELB improved by 0.0351878
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.142
ELB improved by 0.0350517
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.107
ELB improved by 0.0352458
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.071
ELB improved by 0.0357889
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.034
ELB improved by 0.0366827
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.996
ELB improved by 0.03789
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.957
ELB improved by 0.0393064
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.916
ELB improved by 0.0407348
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.874
ELB improved by 0.0418887
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.832
ELB improved by 0.0424522
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.79
ELB improved by 0.0421929
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.748
ELB improved by 0.041068
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.709
ELB improved by 0.039246
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.672
ELB improved by 0.037026
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.638
ELB improved by 0.0347217
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.605
ELB improved by 0.0325873
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.574
ELB improved by 0.0308059
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.545
ELB improved by 0.0295199
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.516
ELB improved by 0.0288824
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.487
ELB improved by 0.0291198
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.456
ELB improved by 0.0306172
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.422
ELB improved by 0.0340328
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.382
ELB improved by 0.0404085
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.33
ELB improved by 0.0510532
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.264
ELB improved by 0.0665361
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.18
ELB improved by 0.0841146
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.084
ELB improved by 0.0961312
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.988
ELB improved by 0.095896
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.902
ELB improved by 0.0860428
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.827
ELB improved by 0.0748753
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.758
ELB improved by 0.0684789
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.688
ELB improved by 0.0704358
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.602
ELB improved by 0.0856596
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.478
ELB improved by 0.124083
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.281
ELB improved by 0.197206
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.994
ELB improved by 0.287116
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.66
ELB improved by 0.334174
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.323
ELB improved by 0.336374
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.992
ELB improved by 0.331082
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.675
ELB improved by 0.316923
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.377
ELB improved by 0.298353
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.083
ELB improved by 0.293932
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.77
ELB improved by 0.313112
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.42
ELB improved by 0.350419
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.051
ELB improved by 0.368296
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.728
ELB improved by 0.323558
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.486
ELB improved by 0.241181
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.32
ELB improved by 0.166288
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.208
ELB improved by 0.111714
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.134
ELB improved by 0.0747688
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.083
ELB improved by 0.0506181
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.048
ELB improved by 0.03515
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.023
ELB improved by 0.0253281
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.004
ELB improved by 0.0190715
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.989
ELB improved by 0.0150257
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.976
ELB improved by 0.0123404
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.966
ELB improved by 0.0104935
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.957
ELB improved by 0.00916906
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-856.129
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-549.775
ELB improved by 306.354
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.843
ELB improved by 56.9315
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.965
ELB improved by 29.8783
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.553
ELB improved by 12.412
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.721
ELB improved by 5.8314
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.61
ELB improved by 4.11137
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.832
ELB improved by 3.7781
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.851
ELB improved by 3.9807
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.47
ELB improved by 4.38155
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.821
ELB improved by 4.64866
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.346
ELB improved by 4.47462
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.524
ELB improved by 3.82288
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.538
ELB improved by 2.98544
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.286
ELB improved by 2.25198
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.611
ELB improved by 1.67473
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.427
ELB improved by 1.1841
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.624
ELB improved by 0.802903
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.063
ELB improved by 0.561756
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.64
ELB improved by 0.422334
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.299
ELB improved by 0.340861
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.008
ELB improved by 0.291793
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.746
ELB improved by 0.262039
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.501
ELB improved by 0.244711
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.265
ELB improved by 0.235938
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.032
ELB improved by 0.233432
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.796
ELB improved by 0.235842
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.553
ELB improved by 0.242427
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.3
ELB improved by 0.252888
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.033
ELB improved by 0.267262
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.747
ELB improved by 0.285876
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.438
ELB improved by 0.309334
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.099
ELB improved by 0.338516
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.725
ELB improved by 0.37458
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.306
ELB improved by 0.418946
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.833
ELB improved by 0.473236
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.293
ELB improved by 0.539185
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.675
ELB improved by 0.618646
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.961
ELB improved by 0.714153
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.129
ELB improved by 0.831651
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.14
ELB improved by 0.989033
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.913
ELB improved by 1.22744
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.368
ELB improved by 1.54481
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.689
ELB improved by 1.67866
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.28
ELB improved by 1.40897
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.265
ELB improved by 1.01535
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.554
ELB improved by 0.71065
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.05
ELB improved by 0.504317
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.683
ELB improved by 0.367144
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.408
ELB improved by 0.274793
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.197
ELB improved by 0.210867
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.032
ELB improved by 0.165055
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.901
ELB improved by 0.131079
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.796
ELB improved by 0.105154
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.711
ELB improved by 0.0849786
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.642
ELB improved by 0.0691006
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.585
ELB improved by 0.0565399
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.538
ELB improved by 0.0465767
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.5
ELB improved by 0.0386518
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.468
ELB improved by 0.0323223
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.44
ELB improved by 0.0272392
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.417
ELB improved by 0.0231307
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.397
ELB improved by 0.0197876
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.38
ELB improved by 0.0170489
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.366
ELB improved by 0.0147907
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.353
ELB improved by 0.0129171
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.341
ELB improved by 0.0113536
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.331
ELB improved by 0.0100415
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.322
ELB improved by 0.00893454
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-822.145
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-554.967
ELB improved by 267.177
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-497.342
ELB improved by 57.6251
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.383
ELB improved by 33.9589
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.568
ELB improved by 13.8152
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.217
ELB improved by 6.35064
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.003
ELB improved by 4.21388
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.37
ELB improved by 3.63373
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.778
ELB improved by 3.5918
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.992
ELB improved by 3.78557
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.952
ELB improved by 4.04055
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.874
ELB improved by 4.07827
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.266
ELB improved by 3.60782
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.568
ELB improved by 2.69735
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.803
ELB improved by 1.76557
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.696
ELB improved by 1.10701
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.972
ELB improved by 0.72347
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.458
ELB improved by 0.514798
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.055
ELB improved by 0.402248
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.715
ELB improved by 0.339797
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.412
ELB improved by 0.303732
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.128
ELB improved by 0.283467
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.854
ELB improved by 0.274157
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.585
ELB improved by 0.269593
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.326
ELB improved by 0.258781
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.09
ELB improved by 0.235304
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.883
ELB improved by 0.207424
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.696
ELB improved by 0.186597
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.521
ELB improved by 0.175688
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.348
ELB improved by 0.172411
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.174
ELB improved by 0.174454
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.993
ELB improved by 0.180742
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.802
ELB improved by 0.191138
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.596
ELB improved by 0.206076
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.37
ELB improved by 0.226321
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.117
ELB improved by 0.252774
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.831
ELB improved by 0.286253
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.503
ELB improved by 0.327423
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.126
ELB improved by 0.377173
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.688
ELB improved by 0.437551
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.176
ELB improved by 0.512865
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.565
ELB improved by 0.610742
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.821
ELB improved by 0.743727
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.889
ELB improved by 0.931975
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.685
ELB improved by 1.20385
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.116
ELB improved by 1.56906
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.196
ELB improved by 1.91983
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.136
ELB improved by 2.06
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.168
ELB improved by 1.96821
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.45
ELB improved by 1.71815
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.12
ELB improved by 1.33043
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.218
ELB improved by 0.901085
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.637
ELB improved by 0.581377
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.243
ELB improved by 0.394438
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.943
ELB improved by 0.299189
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.691
ELB improved by 0.252013
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.476
ELB improved by 0.215144
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.309
ELB improved by 0.16766
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.191
ELB improved by 0.117247
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.113
ELB improved by 0.0788911
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.058
ELB improved by 0.0549259
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.017
ELB improved by 0.0406376
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.985
ELB improved by 0.0317419
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.959
ELB improved by 0.0257855
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.938
ELB improved by 0.0215175
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.92
ELB improved by 0.0182951
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.904
ELB improved by 0.0157686
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.89
ELB improved by 0.0137335
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.878
ELB improved by 0.0120618
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.867
ELB improved by 0.0106684
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.858
ELB improved by 0.00949382
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.407 0.184 2.576
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.049 | 0.007 | 0.058 | |
| getPIPs | 0.073 | 0.017 | 0.090 | |
| graper | 0.079 | 0.005 | 0.084 | |
| makeExampleData | 0.01 | 0.00 | 0.01 | |
| makeExampleDataWithUnequalGroups | 0.010 | 0.001 | 0.011 | |
| plotELBO | 0.305 | 0.019 | 0.323 | |
| plotGroupPenalties | 0.958 | 0.002 | 0.960 | |
| plotPosterior | 0.661 | 0.000 | 0.662 | |
| predict.graper | 2.017 | 0.016 | 2.034 | |
| print.graper | 0.051 | 0.001 | 0.052 | |