Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2025-01-27 12:08 -0500 (Mon, 27 Jan 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4746 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4494 |
merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4517 |
kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4469 |
taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4395 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 504/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
DAPAR 1.38.0 (landing page) Samuel Wieczorek
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | |||||||||
taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the DAPAR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DAPAR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: DAPAR |
Version: 1.38.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:DAPAR.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings DAPAR_1.38.0.tar.gz |
StartedAt: 2025-01-24 02:20:02 -0500 (Fri, 24 Jan 2025) |
EndedAt: 2025-01-24 02:43:31 -0500 (Fri, 24 Jan 2025) |
EllapsedTime: 1409.7 seconds |
RetCode: 0 |
Status: OK |
CheckDir: DAPAR.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:DAPAR.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings DAPAR_1.38.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/DAPAR.Rcheck’ * using R version 4.4.2 (2024-10-31) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.6 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘DAPAR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘DAPAR’ version ‘1.38.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... NOTE Vignette dependency required without any vignettes:: ‘knitr’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘DAPAR’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE Check_Dataset_Validity: no visible global function definition for ‘exprs’ OWAnova: no visible global function definition for ‘aov’ aggregateIterParallel: no visible binding for global variable ‘cond’ averageIntensities: no visible binding for global variable ‘condition’ averageIntensities: no visible binding for global variable ‘feature’ averageIntensities: no visible binding for global variable ‘intensity’ createMSnset: no visible global function definition for ‘installed.packages’ createMSnset: no visible binding for global variable ‘Prostar.loc’ createMSnset2: no visible global function definition for ‘installed.packages’ createMSnset2: no visible binding for global variable ‘Prostar.loc’ diffAnaVolcanoplot_rCharts: no visible binding for global variable ‘x’ diffAnaVolcanoplot_rCharts: no visible binding for global variable ‘y’ diffAnaVolcanoplot_rCharts: no visible binding for global variable ‘g’ display.CC.visNet: no visible binding for global variable ‘layout_nicely’ getTextForGOAnalysis: no visible binding for global variable ‘textGOParams’ getTextForGOAnalysis: no visible binding for global variable ‘input’ globalAdjPval: no visible global function definition for ‘stack’ heatmapForMissingValues: no visible binding for global variable ‘par’ limmaCompleteTest: no visible binding for global variable ‘A’ limmaCompleteTest: no visible binding for global variable ‘B’ limmaCompleteTest: no visible binding for global variable ‘P.Value’ pepa.test: no visible global function definition for ‘nodes<-’ testAnovaModels : <anonymous>: no visible global function definition for ‘TukeyHSD’ visualizeClusters: no visible binding for global variable ‘adjusted_pvalues’ visualizeClusters: no visible binding for global variable ‘Condition’ visualizeClusters: no visible binding for global variable ‘Intensity’ visualizeClusters: no visible binding for global variable ‘FDR_threshold’ visualizeClusters: no visible binding for global variable ‘feature’ wrapperClassic1wayAnova: no visible binding for global variable ‘Pr(>F)1’ wrapperRunClustering: no visible global function definition for ‘str_c’ Undefined global functions or variables: A B Condition FDR_threshold Intensity P.Value Pr(>F)1 Prostar.loc TukeyHSD adjusted_pvalues aov cond condition exprs feature g input installed.packages intensity layout_nicely nodes<- par stack str_c textGOParams x y Consider adding importFrom("graphics", "par") importFrom("stats", "TukeyHSD", "aov") importFrom("utils", "installed.packages", "stack") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed wrapper.compareNormalizationD_HC 108.877 48.873 187.196 wrapper.dapar.impute.mi 32.208 3.697 47.063 barplotEnrichGO_HC 15.846 7.255 51.085 checkClusterability 7.438 4.307 13.187 barplotGroupGO_HC 9.068 2.663 22.164 group_GO 8.555 1.385 15.077 scatterplotEnrichGO_HC 8.652 1.144 11.661 enrich_GO 8.104 1.433 13.188 densityPlotD_HC 6.355 2.572 10.304 wrapper.CVDistD_HC 4.598 1.867 8.035 CVDistD_HC 5.847 0.400 7.528 mvImage 5.662 0.377 6.932 wrapperRunClustering 4.486 0.759 12.599 SetCC 2.733 2.120 7.507 buildGraph 2.210 2.467 5.583 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/Users/biocbuild/bbs-3.20-bioc/meat/DAPAR.Rcheck/00check.log’ for details.
DAPAR.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL DAPAR ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’ * installing *source* package ‘DAPAR’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DAPAR)
DAPAR.Rcheck/tests/testthat.Rout
R version 4.4.2 (2024-10-31) -- "Pile of Leaves" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin20 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(DAPAR) This is the 'DAPAR' version 1.38.0. To get started, visit http://www.prostar-proteomics.org/ > > test_check("DAPAR") Iterations: 1 / 1 - Imputation MNAR OK - Imputation MCAR in progress - 3 % - 6 % - 9 % - 12 % - 15 % - 18 % - 21 % - 24 % - 27 % - 30 % - 33 % - 36 % - 39 % - 42 % - 45 % - 48 % - 51 % - 54 % - 57 % - 60 % - 63 % - 66 % - 69 % - 72 % - 75 % - 78 % - 81 % - 84 % - 87 % - 90 % - 93 % - 96 % - 99 % - Iterations: 1 / 1 - Imputation MNAR OK - Imputation MCAR in progress - 3 % - 6 % - 9 % - 12 % - 15 % - 18 % - 21 % - 24 % - 27 % - 30 % - 33 % - 36 % - 39 % - 42 % - 45 % - 48 % - 51 % - 54 % - 57 % - 60 % - 63 % - 66 % - 69 % - 72 % - 75 % - 78 % - 81 % - 84 % - 87 % - 90 % - 93 % - 96 % - 99 % - Imputation in condition 1 ... In progress: 10 % - 20 % - 30 % - 40 % - 50 % - 60 % - 70 % - 80 % - 90 % - 100 % - Imputation in condition 2 ... In progress: 10 % - 20 % - 30 % - 40 % - 50 % - 60 % - 70 % - 80 % - 90 % - 100 % - [ FAIL 0 | WARN 17 | SKIP 0 | PASS 66 ] [ FAIL 0 | WARN 17 | SKIP 0 | PASS 66 ] > > proc.time() user system elapsed 61.557 2.924 95.380
DAPAR.Rcheck/DAPAR-Ex.timings
name | user | system | elapsed | |
AggregateMetacell | 0.655 | 0.040 | 1.230 | |
BuildAdjacencyMatrix | 0.450 | 0.020 | 0.688 | |
BuildColumnToProteinDataset | 0.539 | 0.024 | 0.922 | |
BuildMetaCell | 0.998 | 0.075 | 1.682 | |
CVDistD_HC | 5.847 | 0.400 | 7.528 | |
Children | 0.013 | 0.002 | 0.016 | |
CountPep | 1.557 | 0.032 | 1.842 | |
ExtendPalette | 0.037 | 0.005 | 0.186 | |
GOAnalysisSave | 0.000 | 0.001 | 0.001 | |
GetCC | 2.512 | 0.054 | 2.945 | |
GetColorsForConditions | 0.364 | 0.023 | 0.669 | |
GetDetailedNbPeptides | 0.519 | 0.013 | 0.597 | |
GetDetailedNbPeptidesUsed | 0.000 | 0.000 | 0.001 | |
GetIndices_BasedOnConditions | 0.467 | 0.020 | 0.648 | |
GetIndices_MetacellFiltering | 0.530 | 0.022 | 0.775 | |
GetIndices_WholeLine | 0.522 | 0.011 | 0.654 | |
GetIndices_WholeMatrix | 0.527 | 0.013 | 0.641 | |
GetKeyId | 0.480 | 0.014 | 0.590 | |
GetMatAdj | 0.614 | 0.018 | 0.803 | |
GetMetacell | 0 | 0 | 0 | |
GetMetacellTags | 0.520 | 0.019 | 0.684 | |
GetNbPeptidesUsed | 0.524 | 0.015 | 0.676 | |
GetNbTags | 0.000 | 0.001 | 0.000 | |
GetSoftAvailables | 0.001 | 0.000 | 0.002 | |
GetTypeofData | 0.484 | 0.014 | 0.604 | |
Get_AllComparisons | 0.456 | 0.031 | 0.589 | |
GlobalQuantileAlignment | 0.519 | 0.009 | 0.681 | |
GraphPepProt | 0.530 | 0.007 | 0.643 | |
LH0 | 0.000 | 0.001 | 0.000 | |
LH0.lm | 0.000 | 0.001 | 0.001 | |
LH1 | 0.000 | 0.001 | 0.001 | |
LH1.lm | 0.000 | 0.001 | 0.001 | |
LOESS | 1.730 | 0.031 | 2.264 | |
MeanCentering | 0.465 | 0.043 | 0.805 | |
MetaCellFiltering | 0.612 | 0.017 | 0.743 | |
MetacellFilteringScope | 0.000 | 0.000 | 0.001 | |
Metacell_DIA_NN | 0.822 | 0.074 | 1.840 | |
Metacell_generic | 0.633 | 0.077 | 1.326 | |
Metacell_maxquant | 0.738 | 0.102 | 1.790 | |
Metacell_proline | 0.773 | 0.043 | 1.120 | |
NumericalFiltering | 0.570 | 0.033 | 0.842 | |
NumericalgetIndicesOfLinesToRemove | 0.507 | 0.015 | 0.666 | |
OWAnova | 0.013 | 0.002 | 0.018 | |
QuantileCentering | 0.486 | 0.014 | 0.607 | |
SetCC | 2.733 | 2.120 | 7.507 | |
SetMatAdj | 0.613 | 0.011 | 0.703 | |
Set_POV_MEC_tags | 0.521 | 0.014 | 0.722 | |
StringBasedFiltering | 0.579 | 0.012 | 0.717 | |
StringBasedFiltering2 | 0.572 | 0.009 | 0.645 | |
SumByColumns | 3.150 | 0.080 | 4.202 | |
SymFilteringOperators | 0.000 | 0.001 | 0.001 | |
UpdateMetacellAfterImputation | 0.461 | 0.030 | 0.865 | |
aggregateIter | 0.818 | 0.031 | 1.156 | |
aggregateIterParallel | 0.000 | 0.001 | 0.001 | |
aggregateMean | 0.672 | 0.019 | 0.882 | |
aggregateSum | 0.751 | 0.016 | 0.993 | |
aggregateTopn | 0.542 | 0.033 | 0.903 | |
applyAnovasOnProteins | 0.155 | 0.008 | 0.231 | |
averageIntensities | 1.042 | 0.522 | 4.543 | |
barplotEnrichGO_HC | 15.846 | 7.255 | 51.085 | |
barplotGroupGO_HC | 9.068 | 2.663 | 22.164 | |
boxPlotD_HC | 0.514 | 0.262 | 1.156 | |
buildGraph | 2.210 | 2.467 | 5.583 | |
check.conditions | 0.460 | 0.014 | 0.527 | |
check.design | 0.464 | 0.015 | 0.568 | |
checkClusterability | 7.438 | 4.307 | 13.187 | |
classic1wayAnova | 0.001 | 0.000 | 0.000 | |
compareNormalizationD_HC | 0.222 | 0.123 | 0.486 | |
compute.selection.table | 1.513 | 0.290 | 2.341 | |
compute_t_tests | 2.662 | 0.508 | 3.901 | |
corrMatrixD_HC | 0.750 | 0.162 | 1.147 | |
createMSnset | 3.205 | 0.259 | 4.663 | |
createMSnset2 | 3.149 | 0.227 | 4.347 | |
dapar_hc_ExportMenu | 0.287 | 0.309 | 1.005 | |
dapar_hc_chart | 0.123 | 0.099 | 0.313 | |
deleteLinesFromIndices | 0.566 | 0.035 | 0.727 | |
densityPlotD_HC | 6.355 | 2.572 | 10.304 | |
diffAnaComputeAdjustedPValues | 0.264 | 0.069 | 0.374 | |
diffAnaComputeFDR | 0 | 0 | 0 | |
diffAnaGetSignificant | 0.476 | 0.099 | 0.729 | |
diffAnaSave | 0.441 | 0.088 | 0.686 | |
diffAnaVolcanoplot | 0.265 | 0.046 | 0.379 | |
diffAnaVolcanoplot_rCharts | 0.687 | 0.226 | 1.815 | |
display.CC.visNet | 1.823 | 0.164 | 2.751 | |
enrich_GO | 8.104 | 1.433 | 13.188 | |
finalizeAggregation | 0.000 | 0.000 | 0.001 | |
findMECBlock | 0.544 | 0.037 | 0.813 | |
formatHSDResults | 0.001 | 0.000 | 0.001 | |
formatLimmaResult | 0.252 | 0.052 | 0.387 | |
formatPHResults | 0.000 | 0.001 | 0.001 | |
formatPHTResults | 0.000 | 0.000 | 0.001 | |
fudge2LRT | 0.000 | 0.001 | 0.001 | |
get.pep.prot.cc | 2.015 | 0.150 | 2.683 | |
getDesignLevel | 0.459 | 0.012 | 0.634 | |
getIndicesConditions | 0.462 | 0.019 | 0.623 | |
getIndicesOfLinesToRemove | 0.366 | 0.027 | 0.555 | |
getListNbValuesInLines | 0.313 | 0.020 | 0.774 | |
getNumberOf | 0.424 | 0.038 | 0.791 | |
getNumberOfEmptyLines | 0.534 | 0.016 | 0.676 | |
getPourcentageOfMV | 0.519 | 0.030 | 0.743 | |
getProcessingInfo | 0.462 | 0.016 | 0.625 | |
getProteinsStats | 0.533 | 0.043 | 0.792 | |
getQuantile4Imp | 0.099 | 0.006 | 0.152 | |
getTextForAggregation | 0.000 | 0.000 | 0.001 | |
getTextForAnaDiff | 0.001 | 0.001 | 0.002 | |
getTextForFiltering | 0.000 | 0.001 | 0.001 | |
getTextForGOAnalysis | 0.001 | 0.001 | 0.001 | |
getTextForHypothesisTest | 0.000 | 0.000 | 0.001 | |
getTextForNewDataset | 0.004 | 0.001 | 0.005 | |
getTextForNormalization | 0.001 | 0.001 | 0.002 | |
getTextForpeptideImputation | 0.001 | 0.001 | 0.001 | |
getTextForproteinImputation | 0.000 | 0.000 | 0.001 | |
globalAdjPval | 0.825 | 0.099 | 1.195 | |
group_GO | 8.555 | 1.385 | 15.077 | |
hc_logFC_DensityPlot | 1.365 | 0.669 | 2.745 | |
hc_mvTypePlot2 | 1.779 | 0.625 | 2.961 | |
heatmapD | 0.996 | 0.126 | 1.447 | |
heatmapForMissingValues | 0.267 | 0.046 | 0.387 | |
histPValue_HC | 0.383 | 0.143 | 0.724 | |
impute.pa2 | 0.604 | 0.044 | 0.706 | |
inner.aggregate.iter | 0.607 | 0.045 | 0.728 | |
inner.aggregate.topn | 0.554 | 0.027 | 0.761 | |
inner.mean | 0.606 | 0.039 | 0.835 | |
inner.sum | 0.541 | 0.026 | 0.729 | |
is.subset | 0.000 | 0.000 | 0.001 | |
limmaCompleteTest | 3.519 | 0.149 | 4.595 | |
listSheets | 0.000 | 0.001 | 0.001 | |
make.contrast | 0.491 | 0.012 | 0.629 | |
make.design.1 | 0.446 | 0.017 | 0.609 | |
make.design.2 | 0.434 | 0.018 | 0.537 | |
make.design.3 | 0.646 | 0.031 | 0.758 | |
make.design | 0.485 | 0.009 | 0.575 | |
match.metacell | 0.542 | 0.021 | 0.600 | |
metacell.def | 0.013 | 0.006 | 0.052 | |
metacellHisto_HC | 0.606 | 0.105 | 1.409 | |
metacellPerLinesHistoPerCondition_HC | 0.523 | 0.197 | 1.178 | |
metacellPerLinesHisto_HC | 1.124 | 0.501 | 2.694 | |
metacombine | 0.166 | 0.013 | 0.183 | |
mvImage | 5.662 | 0.377 | 6.932 | |
my_hc_ExportMenu | 0.293 | 0.257 | 0.889 | |
my_hc_chart | 0.284 | 0.244 | 0.568 | |
nonzero | 0.030 | 0.003 | 0.047 | |
normalizeMethods.dapar | 0.000 | 0.000 | 0.001 | |
pepa.test | 0.539 | 0.022 | 0.712 | |
pkgs.require | 0.000 | 0.001 | 0.001 | |
plotJitter | 2.047 | 0.634 | 3.500 | |
plotJitter_rCharts | 1.864 | 0.166 | 2.980 | |
plotPCA_Eigen | 0.657 | 0.083 | 0.949 | |
plotPCA_Eigen_hc | 0.470 | 0.008 | 0.501 | |
plotPCA_Ind | 0.440 | 0.010 | 0.503 | |
plotPCA_Var | 0.460 | 0.009 | 0.561 | |
postHocTest | 0.000 | 0.000 | 0.001 | |
proportionConRev_HC | 0.111 | 0.106 | 0.534 | |
rbindMSnset | 0.678 | 0.067 | 0.852 | |
reIntroduceMEC | 0.606 | 0.048 | 0.715 | |
readExcel | 0.000 | 0.000 | 0.001 | |
removeLines | 0.569 | 0.043 | 0.749 | |
samLRT | 0.000 | 0.000 | 0.001 | |
saveParameters | 0.468 | 0.013 | 0.630 | |
scatterplotEnrichGO_HC | 8.652 | 1.144 | 11.661 | |
search.metacell.tags | 0.015 | 0.004 | 0.020 | |
separateAdjPval | 0.260 | 0.026 | 0.367 | |
splitAdjacencyMat | 0.542 | 0.025 | 0.730 | |
test.design | 0.499 | 0.008 | 0.585 | |
testAnovaModels | 0.167 | 0.022 | 0.271 | |
thresholdpval4fdr | 0.000 | 0.001 | 0.000 | |
translatedRandomBeta | 0.006 | 0.028 | 0.034 | |
univ_AnnotDbPkg | 0.303 | 0.180 | 0.674 | |
violinPlotD | 0.605 | 0.059 | 0.840 | |
visualizeClusters | 2.604 | 0.386 | 3.522 | |
vsn | 0.927 | 0.034 | 1.119 | |
wrapper.CVDistD_HC | 4.598 | 1.867 | 8.035 | |
wrapper.compareNormalizationD_HC | 108.877 | 48.873 | 187.196 | |
wrapper.corrMatrixD_HC | 0.790 | 0.192 | 3.726 | |
wrapper.dapar.impute.mi | 32.208 | 3.697 | 47.063 | |
wrapper.heatmapD | 0.784 | 0.072 | 1.064 | |
wrapper.impute.KNN | 0.591 | 0.061 | 0.722 | |
wrapper.impute.detQuant | 0.632 | 0.056 | 0.729 | |
wrapper.impute.fixedValue | 0.642 | 0.060 | 0.742 | |
wrapper.impute.mle | 0.525 | 0.034 | 0.562 | |
wrapper.impute.pa | 0.196 | 0.038 | 0.664 | |
wrapper.impute.pa2 | 0.550 | 0.045 | 0.687 | |
wrapper.impute.slsa | 0.891 | 0.074 | 1.113 | |
wrapper.mvImage | 0.254 | 0.048 | 0.385 | |
wrapper.normalizeD | 0.486 | 0.013 | 0.546 | |
wrapper.pca | 0.231 | 0.045 | 0.317 | |
wrapperCalibrationPlot | 0.284 | 0.058 | 0.653 | |
wrapperClassic1wayAnova | 0.000 | 0.001 | 0.000 | |
wrapperRunClustering | 4.486 | 0.759 | 12.599 | |
write.excel | 1.313 | 0.313 | 3.939 | |
writeMSnsetToCSV | 0.490 | 0.036 | 0.649 | |
writeMSnsetToExcel | 1.813 | 0.445 | 3.026 | |