Britta Velten
| Snapshot Date: 2026-03-13 13:45 -0400 (Fri, 13 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-03-14 11:57 -0400 (Sat, 14 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4892 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2026-03-14 00:08:25 -0400 (Sat, 14 Mar 2026) |
| EndedAt: 2026-03-14 00:09:56 -0400 (Sat, 14 Mar 2026) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-821.504
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-539.897
ELB improved by 281.607
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.853
ELB improved by 59.0438
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.751
ELB improved by 32.1019
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.289
ELB improved by 11.4623
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.894
ELB improved by 4.39464
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.359
ELB improved by 2.53497
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.547
ELB improved by 1.81211
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.044
ELB improved by 1.50353
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.688
ELB improved by 1.35566
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.413
ELB improved by 1.27517
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.188
ELB improved by 1.22466
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422
ELB improved by 1.18777
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.843
ELB improved by 1.15698
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.716
ELB improved by 1.12779
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.62
ELB improved by 1.09576
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.565
ELB improved by 1.0552
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.565
ELB improved by 0.999637
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.641
ELB improved by 0.924215
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.812
ELB improved by 0.828927
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.092
ELB improved by 0.720408
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.481
ELB improved by 0.610253
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.971
ELB improved by 0.510371
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.542
ELB improved by 0.428512
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.176
ELB improved by 0.36678
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.853
ELB improved by 0.323081
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.559
ELB improved by 0.293508
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.285
ELB improved by 0.274077
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.023
ELB improved by 0.26148
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.77
ELB improved by 0.253207
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.523
ELB improved by 0.247402
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.28
ELB improved by 0.242704
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.042
ELB improved by 0.238123
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.809
ELB improved by 0.232975
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.582
ELB improved by 0.226857
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.363
ELB improved by 0.219617
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.151
ELB improved by 0.211324
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.949
ELB improved by 0.20221
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.756
ELB improved by 0.192603
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.574
ELB improved by 0.182852
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.4
ELB improved by 0.173267
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.236
ELB improved by 0.164076
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.081
ELB improved by 0.155408
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.934
ELB improved by 0.14731
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.794
ELB improved by 0.139778
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.661
ELB improved by 0.132811
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.534
ELB improved by 0.126443
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.414
ELB improved by 0.120769
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.298
ELB improved by 0.11594
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.186
ELB improved by 0.112166
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.076
ELB improved by 0.109714
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.967
ELB improved by 0.108923
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.857
ELB improved by 0.110206
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.743
ELB improved by 0.114003
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.622
ELB improved by 0.120629
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.492
ELB improved by 0.129983
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.351
ELB improved by 0.141319
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.197
ELB improved by 0.1535
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.032
ELB improved by 0.165789
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.853
ELB improved by 0.178236
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.662
ELB improved by 0.190998
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.459
ELB improved by 0.203549
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.244
ELB improved by 0.214694
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.021
ELB improved by 0.223269
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.792
ELB improved by 0.229061
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.558
ELB improved by 0.233584
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.318
ELB improved by 0.240423
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.063
ELB improved by 0.254754
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.783
ELB improved by 0.280178
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.474
ELB improved by 0.308924
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.159
ELB improved by 0.31473
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.877
ELB improved by 0.282342
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.641
ELB improved by 0.235626
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.44
ELB improved by 0.201095
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.255
ELB improved by 0.184729
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.075
ELB improved by 0.180736
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.898
ELB improved by 0.176259
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.74
ELB improved by 0.158741
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.609
ELB improved by 0.130498
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.505
ELB improved by 0.104354
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.418
ELB improved by 0.0863646
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.344
ELB improved by 0.0746857
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.278
ELB improved by 0.0659331
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.22
ELB improved by 0.0579381
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.17
ELB improved by 0.049939
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.128
ELB improved by 0.0419247
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.094
ELB improved by 0.0340766
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.067
ELB improved by 0.0266846
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.047
ELB improved by 0.0201774
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.032
ELB improved by 0.0149304
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.021
ELB improved by 0.0110393
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.013
ELB improved by 0.00831929
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-863.778
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.74
ELB improved by 299.038
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.555
ELB improved by 60.185
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.4
ELB improved by 37.155
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.689
ELB improved by 16.711
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.356
ELB improved by 7.33308
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.177
ELB improved by 4.17911
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.164
ELB improved by 3.01312
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.636
ELB improved by 2.52777
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.334
ELB improved by 2.30239
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.155
ELB improved by 2.17836
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.065
ELB improved by 2.08984
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.059
ELB improved by 2.00645
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.152
ELB improved by 1.90693
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.379
ELB improved by 1.77321
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.784
ELB improved by 1.59489
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.411
ELB improved by 1.3726
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.29
ELB improved by 1.12151
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.418
ELB improved by 0.872405
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.761
ELB improved by 0.656088
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.274
ELB improved by 0.487062
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.91
ELB improved by 0.364019
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.632
ELB improved by 0.278083
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.413
ELB improved by 0.219024
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.235
ELB improved by 0.178232
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.086
ELB improved by 0.149493
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.957
ELB improved by 0.128664
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.844
ELB improved by 0.113074
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.743
ELB improved by 0.101017
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.651
ELB improved by 0.0914052
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.568
ELB improved by 0.083541
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.491
ELB improved by 0.0769712
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.419
ELB improved by 0.0713961
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.353
ELB improved by 0.0666116
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.29
ELB improved by 0.0624739
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.231
ELB improved by 0.0588779
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.176
ELB improved by 0.0557439
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.123
ELB improved by 0.0530093
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.072
ELB improved by 0.050624
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.024
ELB improved by 0.0485467
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.977
ELB improved by 0.046743
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.932
ELB improved by 0.0451835
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.888
ELB improved by 0.0438435
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.845
ELB improved by 0.0427016
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.803
ELB improved by 0.0417392
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.762
ELB improved by 0.0409403
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.722
ELB improved by 0.0402912
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.682
ELB improved by 0.0397797
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.643
ELB improved by 0.0393956
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.604
ELB improved by 0.03913
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.565
ELB improved by 0.0389757
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.526
ELB improved by 0.0389267
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.487
ELB improved by 0.0389785
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.448
ELB improved by 0.0391282
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.408
ELB improved by 0.0393745
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.369
ELB improved by 0.0397182
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.329
ELB improved by 0.0401623
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.288
ELB improved by 0.0407129
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.246
ELB improved by 0.0413794
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.204
ELB improved by 0.0421761
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.161
ELB improved by 0.0431228
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.117
ELB improved by 0.0442473
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.071
ELB improved by 0.0455867
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.024
ELB improved by 0.0471912
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.975
ELB improved by 0.049127
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.924
ELB improved by 0.0514805
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.869
ELB improved by 0.0543619
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.811
ELB improved by 0.0579056
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.749
ELB improved by 0.0622644
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.681
ELB improved by 0.0675881
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.607
ELB improved by 0.0739768
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.526
ELB improved by 0.081403
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.436
ELB improved by 0.0896212
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.338
ELB improved by 0.0981259
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.232
ELB improved by 0.106242
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.119
ELB improved by 0.113356
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411
ELB improved by 0.119142
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.876
ELB improved by 0.123599
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.749
ELB improved by 0.12691
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.62
ELB improved by 0.129265
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.489
ELB improved by 0.130794
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.357
ELB improved by 0.131563
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.226
ELB improved by 0.131614
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.095
ELB improved by 0.130988
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.965
ELB improved by 0.129746
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.837
ELB improved by 0.127981
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.711
ELB improved by 0.125819
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.588
ELB improved by 0.123422
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.467
ELB improved by 0.120994
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.348
ELB improved by 0.118789
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.231
ELB improved by 0.117128
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.115
ELB improved by 0.116406
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.997
ELB improved by 0.1171
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.878
ELB improved by 0.119762
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.753
ELB improved by 0.125025
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.619
ELB improved by 0.133677
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.472
ELB improved by 0.146796
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.307
ELB improved by 0.165365
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.119
ELB improved by 0.187683
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.915
ELB improved by 0.204465
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.713
ELB improved by 0.201811
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.535
ELB improved by 0.178099
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.389
ELB improved by 0.1462
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.272
ELB improved by 0.116709
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.179
ELB improved by 0.0926349
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.106
ELB improved by 0.0736159
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.047
ELB improved by 0.0586797
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407
ELB improved by 0.0469562
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.962
ELB improved by 0.0377568
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.932
ELB improved by 0.0305435
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.907
ELB improved by 0.0248937
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.886
ELB improved by 0.0204722
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.869
ELB improved by 0.0170119
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.855
ELB improved by 0.0143002
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.843
ELB improved by 0.0121687
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.832
ELB improved by 0.010485
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.823
ELB improved by 0.00914603
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-846.983
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.935
ELB improved by 272.048
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.22
ELB improved by 62.7146
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.694
ELB improved by 48.526
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.768
ELB improved by 24.926
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.879
ELB improved by 10.8892
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.715
ELB improved by 6.16412
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.076
ELB improved by 4.63938
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.928
ELB improved by 4.14742
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.839
ELB improved by 4.08896
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.654
ELB improved by 4.18538
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.448
ELB improved by 4.2062
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.465
ELB improved by 3.98254
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.948
ELB improved by 3.51678
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.04
ELB improved by 2.90815
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.805
ELB improved by 2.23541
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.146
ELB improved by 1.65876
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.915
ELB improved by 1.23121
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.038
ELB improved by 0.876874
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.43
ELB improved by 0.608014
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.993
ELB improved by 0.436831
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.659
ELB improved by 0.333773
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.389
ELB improved by 0.269879
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.162
ELB improved by 0.227889
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.963
ELB improved by 0.1987
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.785
ELB improved by 0.177513
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.624
ELB improved by 0.161666
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.474
ELB improved by 0.149584
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.334
ELB improved by 0.140282
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.201
ELB improved by 0.133111
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.073
ELB improved by 0.12763
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.95
ELB improved by 0.123533
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.829
ELB improved by 0.120602
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.71
ELB improved by 0.118682
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.593
ELB improved by 0.117663
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.475
ELB improved by 0.117465
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.357
ELB improved by 0.118026
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.238
ELB improved by 0.119288
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.117
ELB improved by 0.121189
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.993
ELB improved by 0.123644
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.866
ELB improved by 0.126542
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.737
ELB improved by 0.129762
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.603
ELB improved by 0.1332
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.467
ELB improved by 0.136819
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.326
ELB improved by 0.140694
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.181
ELB improved by 0.145025
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.031
ELB improved by 0.150122
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.874
ELB improved by 0.156412
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.71
ELB improved by 0.164502
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.535
ELB improved by 0.175359
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.344
ELB improved by 0.190707
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.13
ELB improved by 0.213828
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.879
ELB improved by 0.2512
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.563
ELB improved by 0.315466
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.136
ELB improved by 0.427803
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.533
ELB improved by 0.602798
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.749
ELB improved by 0.783881
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.907
ELB improved by 0.842205
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.129
ELB improved by 0.777222
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.436
ELB improved by 0.693205
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.792
ELB improved by 0.644053
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.156
ELB improved by 0.636307
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.533
ELB improved by 0.623101
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.975
ELB improved by 0.558234
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.447
ELB improved by 0.527659
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.756
ELB improved by 0.690719
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.695
ELB improved by 1.06066
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.671
ELB improved by 1.02411
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.035
ELB improved by 0.636023
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.638
ELB improved by 0.397705
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.346
ELB improved by 0.291304
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.109
ELB improved by 0.237755
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.916
ELB improved by 0.192916
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.775
ELB improved by 0.140787
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.684
ELB improved by 0.0909542
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.628
ELB improved by 0.055839
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.593
ELB improved by 0.0350721
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.57
ELB improved by 0.0231124
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.554
ELB improved by 0.0159317
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.543
ELB improved by 0.0114145
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.534
ELB improved by 0.00847297
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-896.534
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.801
ELB improved by 312.733
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.662
ELB improved by 62.139
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.2
ELB improved by 37.4612
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.942
ELB improved by 15.2581
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.554
ELB improved by 6.38847
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.344
ELB improved by 4.21023
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.683
ELB improved by 3.66087
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.098
ELB improved by 3.58458
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.454
ELB improved by 3.64407
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.838
ELB improved by 3.61614
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.503
ELB improved by 3.33507
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.733
ELB improved by 2.76945
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.666
ELB improved by 2.0671
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.232
ELB improved by 1.43432
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.256
ELB improved by 0.976381
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.571
ELB improved by 0.684222
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.066
ELB improved by 0.50581
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.67
ELB improved by 0.395122
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.347
ELB improved by 0.323169
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.073
ELB improved by 0.273755
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.835
ELB improved by 0.238072
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.624
ELB improved by 0.211251
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.434
ELB improved by 0.190503
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.259
ELB improved by 0.174155
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.098
ELB improved by 0.161163
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.947
ELB improved by 0.150852
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.805
ELB improved by 0.142778
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.668
ELB improved by 0.136654
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.536
ELB improved by 0.132291
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.406
ELB improved by 0.129561
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.278
ELB improved by 0.128338
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.149
ELB improved by 0.128435
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.02
ELB improved by 0.129524
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.889
ELB improved by 0.1311
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.756
ELB improved by 0.132522
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.623
ELB improved by 0.133172
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.49
ELB improved by 0.132631
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.36
ELB improved by 0.130759
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.232
ELB improved by 0.127622
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.109
ELB improved by 0.123366
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.991
ELB improved by 0.118148
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.878
ELB improved by 0.112129
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.773
ELB improved by 0.105489
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.675
ELB improved by 0.0984347
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.583
ELB improved by 0.0911827
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.499
ELB improved by 0.0839401
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.423
ELB improved by 0.0768865
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.352
ELB improved by 0.0701623
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.288
ELB improved by 0.0638646
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.23
ELB improved by 0.0580502
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.178
ELB improved by 0.0527417
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.13
ELB improved by 0.0479355
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.086
ELB improved by 0.0436099
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.046
ELB improved by 0.0397324
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.01
ELB improved by 0.0362645
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.977
ELB improved by 0.033166
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.947
ELB improved by 0.0303975
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.919
ELB improved by 0.0279219
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.893
ELB improved by 0.0257052
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.869
ELB improved by 0.0237168
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.847
ELB improved by 0.0219297
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.827
ELB improved by 0.0203199
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.808
ELB improved by 0.0188667
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.791
ELB improved by 0.0175517
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.774
ELB improved by 0.0163592
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.759
ELB improved by 0.0152754
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.745
ELB improved by 0.0142882
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.731
ELB improved by 0.0133873
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.719
ELB improved by 0.0125634
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.707
ELB improved by 0.0118086
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.696
ELB improved by 0.0111159
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.685
ELB improved by 0.0104791
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.675
ELB improved by 0.00989278
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.526 0.222 2.736
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.001 | 0.055 | |
| getPIPs | 0.047 | 0.004 | 0.051 | |
| graper | 0.079 | 0.005 | 0.085 | |
| makeExampleData | 0.010 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.013 | |
| plotELBO | 0.319 | 0.023 | 0.342 | |
| plotGroupPenalties | 1.081 | 0.043 | 1.124 | |
| plotPosterior | 0.637 | 0.011 | 0.648 | |
| predict.graper | 2.043 | 0.021 | 2.064 | |
| print.graper | 0.046 | 0.007 | 0.052 | |