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This page was generated on 2025-03-23 12:12 -0400 (Sun, 23 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 869
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Package 44/217HostnameOS / ArchINSTALLBUILDCHECK
BSgenome 1.75.1  (landing page)
Hervé Pagès
Snapshot Date: 2025-03-23 12:00 -0400 (Sun, 23 Mar 2025)
git_url: https://git.bioconductor.org/packages/BSgenome
git_branch: devel
git_last_commit: 2a208e2
git_last_commit_date: 2025-01-21 18:24:01 -0400 (Tue, 21 Jan 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for BSgenome on teran2

To the developers/maintainers of the BSgenome package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: BSgenome
Version: 1.75.1
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome
StartedAt: 2025-03-23 12:10:01 -0400 (Sun, 23 Mar 2025)
EndedAt: 2025-03-23 12:10:01 -0400 (Sun, 23 Mar 2025)
EllapsedTime: 0.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome
###
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* checking for file ‘BSgenome/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/inst/extdata/ce2chrX.fa.gz': No space left on device
cp: error writing '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/inst/extdata/ce2dict0.fa': No space left on device
cp: cannot create directory '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/man': No space left on device
cp: cannot create directory '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/vignettes': No space left on device
cp: error writing '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/NAMESPACE': No space left on device
cp: error writing '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/NEWS': No space left on device
cp: error writing '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/README.md': No space left on device
cp: error writing '/tmp/RtmpgtWq5R/Rbuild1c067d39a92522/BSgenome/TODO': No space left on device
 ERROR
copying to build directory failed