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This page was generated on 2025-03-22 12:13 -0400 (Sat, 22 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 869
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Package 110/217HostnameOS / ArchINSTALLBUILDCHECK
Gviz 1.51.0  (landing page)
Robert Ivanek
Snapshot Date: 2025-03-22 12:00 -0400 (Sat, 22 Mar 2025)
git_url: https://git.bioconductor.org/packages/Gviz
git_branch: devel
git_last_commit: 60a0f4a
git_last_commit_date: 2024-10-29 09:40:11 -0400 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for Gviz on teran2

To the developers/maintainers of the Gviz package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: Gviz
Version: 1.51.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data Gviz
StartedAt: 2025-03-22 12:10:06 -0400 (Sat, 22 Mar 2025)
EndedAt: 2025-03-22 12:10:06 -0400 (Sat, 22 Mar 2025)
EllapsedTime: 0.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data Gviz
###
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* checking for file ‘Gviz/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/GSM461176_S2_DRSC_Untreated_1_bmm.bam': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/GSM461176_S2_DRSC_Untreated_1_bmm.bam.bai': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/GSM461179_S2_DRSC_CG8144_RNAi_1_bmm.bam': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/GSM461179_S2_DRSC_CG8144_RNAi_1_bmm.bam.bai': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/biomartVersionsLatest.txt': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/biomartVersionsNow.txt': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/gapped.bam': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/gapped.bam.bai': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/indels.bam': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/indels.bam.bai': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/snps.bam': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/snps.bam.bai': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.2bit': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.bam': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.bam.bai': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.bed': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.bedGraph': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.bw': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.fa': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.fa.fai': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.gff': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.gff1': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.gff2': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.gff3': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.gtf': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/extdata/test.wig': No space left on device
cp: cannot create directory '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/scripts': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/inst/CITATION': No space left on device
cp: cannot create directory '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/man-roxygen': No space left on device
cp: cannot create directory '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/man': No space left on device
cp: cannot create directory '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/tests': No space left on device
cp: cannot create directory '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/vignettes': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/.Rbuildignore': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/.gitignore': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/CITATION.cff': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/LICENSE': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/NAMESPACE': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/NEWS': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/README.md': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/TODO': No space left on device
cp: error writing '/tmp/RtmpDeptQr/Rbuild1052b829cbc5b8/Gviz/Rplots.pdf': No space left on device
 ERROR
copying to build directory failed