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This page was generated on 2025-03-23 12:12 -0400 (Sun, 23 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 869
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Package 179/217HostnameOS / ArchINSTALLBUILDCHECK
Rsubread 2.21.3  (landing page)
Wei Shi , Yang Liao and Gordon K Smyth
Snapshot Date: 2025-03-23 12:00 -0400 (Sun, 23 Mar 2025)
git_url: https://git.bioconductor.org/packages/Rsubread
git_branch: devel
git_last_commit: 9eee9f0
git_last_commit_date: 2025-03-21 00:11:59 -0400 (Fri, 21 Mar 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for Rsubread on teran2

To the developers/maintainers of the Rsubread package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: Rsubread
Version: 2.21.3
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rsubread
StartedAt: 2025-03-23 12:11:22 -0400 (Sun, 23 Mar 2025)
EndedAt: 2025-03-23 12:11:22 -0400 (Sun, 23 Mar 2025)
EllapsedTime: 0.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rsubread
###
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* checking for file ‘Rsubread/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/annot/hg19_RefSeq_exon.txt': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/annot/hg38_RefSeq_exon.txt': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/annot/mm10_RefSeq_exon.txt': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/annot/mm39_RefSeq_exon.txt.gz': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/annot/mm9_RefSeq_exon.txt': No space left on device
cp: cannot create directory '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/doc': No space left on device
cp: cannot create directory '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/extdata': No space left on device
cp: cannot create directory '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/qualf': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/inst/CITATION': No space left on device
cp: cannot create directory '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/man': No space left on device
cp: cannot create directory '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/src': No space left on device
cp: cannot create directory '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/vignettes': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/CHANGE_IN_RELEASED_VERSION': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/NAMESPACE': No space left on device
cp: error writing '/tmp/RtmpZIgAEf/Rbuild1c1fb147495536/Rsubread/configure': No space left on device
 ERROR
copying to build directory failed