Rapid builds (Linux only) of a subset of BioC 3.21<BR>Report updated every 6 hours

Hostname	OS	Arch (*)	R version	Installed pkgs
teran2	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences"	869
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INSTALL results for affy on teran2

To the developers/maintainers of the affy package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: affy

Version: 1.85.1

Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD INSTALL affy

StartedAt: 2025-03-22 12:05:24 -0400 (Sat, 22 Mar 2025)

EndedAt: 2025-03-22 12:05:25 -0400 (Sat, 22 Mar 2025)

EllapsedTime: 1.0 seconds

RetCode: 1

Status: ERROR

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD INSTALL affy
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* installing to library ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library’
* installing *source* package ‘affy’ ...
** this is package ‘affy’ version ‘1.85.1’
** using staged installation
creating cache ./config.cache
checking how to run the C preprocessor... gcc -E
checking for main in -lz... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
gcc -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -DHAVE_ZLIB=1  -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/preprocessCore/include' -I/usr/local/include   -g -O2 -Wall -Werror=format-security -fpic  -g -O2  -Wall -Werror=format-security -c chipbackground.c -o chipbackground.o
chipbackground.c:535:1: fatal error: error writing to /tmp/ccsx62gu.s: No space left on device
  535 | }
      | ^
compilation terminated.
make: *** [/home/rapidbuild/bbs-3.21-bioc-rapid/R/etc/Makeconf:195: chipbackground.o] Error 1
ERROR: compilation failed for package ‘affy’
* removing ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/affy’
* restoring previous ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/affy’