Back to Rapid builds (Linux only) of a subset of BioC 3.21
Report updated every 6 hours

This page was generated on 2025-03-24 12:36 -0400 (Mon, 24 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 870
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 134/217HostnameOS / ArchINSTALLBUILDCHECK
metagenomeSeq 1.49.1  (landing page)
Joseph N. Paulson
Snapshot Date: 2025-03-24 12:00 -0400 (Mon, 24 Mar 2025)
git_url: https://git.bioconductor.org/packages/metagenomeSeq
git_branch: devel
git_last_commit: 96adc06
git_last_commit_date: 2024-12-18 01:49:01 -0400 (Wed, 18 Dec 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped


BUILD results for metagenomeSeq on teran2

To the developers/maintainers of the metagenomeSeq package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: metagenomeSeq
Version: 1.49.1
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data metagenomeSeq
StartedAt: 2025-03-24 12:24:50 -0400 (Mon, 24 Mar 2025)
EndedAt: 2025-03-24 12:24:53 -0400 (Mon, 24 Mar 2025)
EllapsedTime: 3.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data metagenomeSeq
###
##############################################################################
##############################################################################


* checking for file ‘metagenomeSeq/DESCRIPTION’ ... OK
* preparing ‘metagenomeSeq’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘metagenomeSeq’ ...
** this is package ‘metagenomeSeq’ version ‘1.49.1’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for ‘MRihw’ with signature ‘"fitFeatureModelResults"’: no definition for class “fitFeatureModelResults”
in method for ‘MRihw’ with signature ‘"fitZigResults"’: no definition for class “fitZigResults”
Error in lazyLoadDBinsertValue(data, datafile, ascii, compress, envhook) : 
  write failed
Calls: <Anonymous> ... lazyLoadDBinsertVariable -> <Anonymous> -> lazyLoadDBinsertValue
Execution halted
ERROR: lazy loading failed for package ‘metagenomeSeq’
* removing ‘/tmp/Rtmp7A4QBa/Rinst22baf73431a269/metagenomeSeq’
      -----------------------------------
ERROR: package installation failed