Rapid builds (Linux only) of a subset of BioC 3.21<BR>Report updated every 6 hours

Hostname	OS	Arch (*)	R version	Installed pkgs
teran2	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences"	869
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for tximport on teran2

To the developers/maintainers of the tximport package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: tximport

Version: 1.35.0

Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data tximport

StartedAt: 2025-03-23 12:11:32 -0400 (Sun, 23 Mar 2025)

EndedAt: 2025-03-23 12:11:35 -0400 (Sun, 23 Mar 2025)

EllapsedTime: 2.2 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data tximport
###
##############################################################################
##############################################################################


* checking for file ‘tximport/DESCRIPTION’ ... OK
* preparing ‘tximport’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘tximport’ ...
** this is package ‘tximport’ version ‘1.35.0’
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
Error in as.list.environment(base::getNamespace("tximport"), all.names = TRUE) : 
  lazy-load database '/tmp/RtmpaXF2lG/Rinst1c232a10640f57/tximport/R/tximport.rdb' is corrupt
Calls: <Anonymous> ... withCallingHandlers -> <Anonymous> -> <Anonymous> -> as.list.environment
Execution halted
ERROR: loading failed
* removing ‘/tmp/RtmpaXF2lG/Rinst1c232a10640f57/tximport’
      -----------------------------------
ERROR: package installation failed