Back to the "Multiple platform build/check report"
| Package 82/205 | OS | Arch | BUILD | CHECK | BUILD BIN |
graph1.11.14Seth Falcon | Linux (SUSE 9.2) | x86_64 | OK | WARNINGS | |
| Linux (SUSE 9.2) | i686 | OK | WARNINGS | ||
| Solaris 2.9 | sparc | OK | OK | ||
| Linux (SUSE 10.0) | x86_64 | OK | WARNINGS | ||
| Windows Server 2003 | x86_64 | OK | [ WARNINGS ] | OK | |
| Windows XP | i686 | OK | WARNINGS | skipped | |
| Mac OS X (10.4.6) | i686 | OK | WARNINGS |
| Package: graph |
| Version: 1.11.14 |
| Command: D:\biocbld\1.9d\R\bin\R.exe CMD check graph_1.11.14.tar.gz |
| RetCode: 0 |
| Time: 146.4 seconds |
| Status: WARNINGS |
| CheckDir: graph.Rcheck |
| Warnings: 3 |
* checking for working latex ... OK * using log directory 'D:/biocbld/1.9d/Rpacks/graph.Rcheck' * using R version 2.4.0 alpha (2006-09-10 r39242) * checking for file 'graph/DESCRIPTION' ... OK * this is package 'graph' version '1.11.14' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'graph' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... WARNING Loading required package: Ruuid Loading required package: methods Error in inherits(x, "factor") : could not find function "installed.packages" Error: .onLoad failed in 'loadNamespace' for 'Ruuid' Error: package 'Ruuid' could not be loaded Execution halted It looks like this package (or one of its dependent packages) has an unstated dependence on a standard package. All dependencies must be declared in DESCRIPTION. See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. * checking whether the name space can be loaded with stated dependencies ... WARNING Error in .asEnvironmentPackage(where) : Package 'methods' is not loaded Error: unable to load R code in package 'Ruuid' Execution halted A namespace must be able to be loaded with just the base namespace loaded: otherwise if the namespace gets loaded by a saved object, the session will be unable to start. Probably some imports need to be declared in the NAMESPACE file. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... WARNING Undocumented S4 methods: generic 'edgeDataDefaults<-' and siglist 'graph,character,ANY' generic 'edgeWeights' and siglist 'distGraph,ANY' generic 'edgeWeights' and siglist 'clusterGraph,ANY' generic 'nodeDataDefaults<-' and siglist 'graph,character,ANY' All user-level objects in a package (including S4 classes and methods) should have documentation entries. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable use of $BLAS_LIBS ... OK * creating graph-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating graph-manual.tex ... OK * checking graph-manual.tex ... OK WARNING: There were 3 warnings, see D:/biocbld/1.9d/Rpacks/graph.Rcheck/00check.log for details
graph.Rcheck/00install.out:
installing R.css in D:/biocbld/1.9d/Rpacks/graph.Rcheck
---------- Making package graph ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making graph.d from graph.c
gcc -Id:/biocbld/1.9d/R/include -Wall -O2 -std=gnu99 -c graph.c -o graph.o
windres --include-dir d:/biocbld/1.9d/R/include -i graph_res.rc -o graph_res.o
gcc -shared -s -o graph.dll graph.def graph.o graph_res.o -Ld:/biocbld/1.9d/R/bin -lR
... DLL made
installing DLL
installing R files
save image
Loading required package: Ruuid
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'graph'
Formats: text html latex example chm
DFS text html latex example chm
IMCA text html latex example chm
acc-methods text html latex example chm
addEdge text html latex example chm
addNode text html latex example chm
adj-methods text html latex example chm
apoptosisGraph text html latex example chm
asGraphProperty text html latex example chm
attrData-class text html latex example chm
attrDataItem-methods text html latex chm
attrDefaults-methods text html latex chm
aveNumEdges text html latex example chm
biocRepos text html latex example chm
boundary text html latex example chm
buildRepDepGraph text html latex example chm
calcProb text html latex example chm
calcSumProb text html latex example chm
clearNode text html latex example chm
clusterGraph-class text html latex example chm
clusteringCoefficient-methods text html latex example chm
combineNodes text html latex example chm
distGraph-class text html latex example chm
duplicatedEdges text html latex example chm
edgeData-methods text html latex chm
edgeDataDefaults-methods text html latex chm
edgeMatrix text html latex example chm
edgeWeights text html latex example chm
fromGXL-methods text html latex example chm
gEdge-class text html latex example chm
gNode-class text html latex example chm
generalGraph-class text html latex example chm
graph-class text html latex example chm
graph2SparseM text html latex example chm
graphAM-class text html latex example chm
graphExamples text html latex example chm
graphH-class text html latex example chm
graphID-class text html latex chm
graphNEL-class text html latex example chm
hashtable-class text html latex example chm
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inEdges text html latex example chm
internal text html latex chm
isAdjacent-methods text html latex chm
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listEdges text html latex example chm
matrix2Graph text html latex example chm
mostEdges text html latex example chm
nodeData-methods text html latex chm
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numNoEdges text html latex example chm
propertyHolder-class text html latex example chm
randomEGraph text html latex example chm
randomGraph text html latex example chm
randomNodeGraph text html latex example chm
removeEdge text html latex example chm
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simpleEdge-class text html latex example chm
standardLabeling text html latex example chm
subGraph text html latex example chm
toDotR-methods text html latex example chm
ugraph text html latex example chm
validGraph text html latex example chm
write.tlp text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\1.9d\Rpacks\graph.Rcheck\00_pkg_src\graph\chm\graph.chm
Compile time: 0 minutes, 0 seconds
64 Topics
486 Local links
5 Internet links
1 Graphic
Created d:\biocbld\1.9d\Rpacks\graph.Rcheck\00_pkg_src\graph\chm\graph.chm, 93,910 bytes
Compression decreased file by 186,281 bytes.
adding MD5 sums
* DONE (graph)