KEGGgraph 1.1.0
Jitao David Zhang
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/KEGGgraph | | Last Changed Rev: 40061 / Revision: 42512 | | Last Changed Date: 2009-06-10 07:58:30 -0700 (Wed, 10 Jun 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | [ OK ] | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'KEGGgraph/DESCRIPTION' ... OK
* preparing 'KEGGgraph':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'KEGGgraph' ...
** R
** data
** inst
** preparing package for lazy loading
Attaching package: 'graph'
The following object(s) are masked from package:XML :
addNode
** help
*** installing help indices
>>> Building/Updating help pages for package 'KEGGgraph'
Formats: text html latex example
KEGGEdge-class text html latex example
KEGGEdgeSubType-class text html latex example
KEGGEdgeSubtype text html latex example
KEGGGraphics-class text html latex example
KEGGGroup-class text html latex example
KEGGNode-class text html latex example
KEGGPathway-class text html latex example
KEGGPathwayInfo-class text html latex example
KEGGReaction-class text html latex example
KEGGpathway2Graph text html latex example
KEGGpathway2reactionGraph text html latex example
expandKEGGNode text html latex
expandKEGGPathway text html latex example
getDisplayName-methods text html latex example
getEntryID-methods text html latex example
getKEGGID-methods text html latex example
getKEGGgeneLink-methods text html latex example
getKEGGnodeData text html latex example
getKGMLurl text html latex example
getName-methods text html latex example
getNamedElement text html latex example
getPathwayInfo-methods text html latex example
getReactions-methods text html latex example
getRgraphvizEdgeNames text html latex example
getSubtype-methods text html latex example
getTitle-methods text html latex example
getType-methods text html latex example
getValue-methods text html latex
graphDensity text html latex example
isHomoList text html latex example
kgmlFileName2PathwayName text html latex
mergeGraphs text html latex
mergeKEGGgraphs text html latex example
neighborhood text html latex example
parseEntry text html latex
parseGraphics text html latex
parseKGML text html latex example
parseKGML2Graph text html latex example
parseKGMLexpandMaps text html latex
parsePathwayInfo text html latex
parseReaction text html latex
parseRelation text html latex
parseSubType text html latex
plotKEGGgraph text html latex example
pvalue2asterisk text html latex example
queryKEGGsubgraph text html latex example
randomSubGraph text html latex example
splitKEGGgroup text html latex example
subGraphByNodeType text html latex example
subKEGGgraph text html latex example
subtypeDisplay-methods text html latex
top text html latex
translateKEGGID2GeneID text html latex example
translateKEGGgraph text html latex example
** building package indices ...
* DONE (KEGGgraph)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'KEGGgraph_1.1.0.tar.gz'