aCGH 1.18.1
Jane Fridlyand
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/aCGH | | Last Changed Rev: 42112 / Revision: 42512 | | Last Changed Date: 2009-10-01 16:44:04 -0700 (Thu, 01 Oct 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'aCGH/DESCRIPTION' ... OK
* preparing 'aCGH':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* Installing *source* package 'aCGH' ...
** libs
making DLL ...
g++ -I"e:/biocbld/bbs-2.4-bioc/R/include" -g3 -O2 -Wall -c hmm.cpp -o hmm.o
g++ -shared -s -o aCGH.dll tmp.def hmm.o -lm -Le:/biocbld/bbs-2.4-bioc/R/bin -lR
... done
** R
** data
** demo
** inst
** preparing package for lazy loading
Loading required package: splines
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
** help
*** installing help indices
>>> Building/Updating help pages for package 'aCGH'
Formats: text html latex example chm
aCGH text html latex example chm
aCGH.process text html latex example chm
aCGH.read.Sprocs text html latex example chm
aCGH.test text html latex chm
clusterGenome text html latex example chm
colorectal text html latex example chm
computeSD.func text html latex chm
fga.func text html latex example chm
find.genomic.events text html latex chm
find.hmm.states text html latex example chm
findAber.func text html latex chm
findAmplif.func text html latex chm
findOutliers.func text html latex chm
findTrans.func text html latex chm
gainLoss text html latex example chm
heatmap text html latex example chm
human.chrom.info.Jul03 text html latex chm
human.chrom.info.May04 text html latex chm
impute.HMM text html latex example chm
impute.lowess text html latex example chm
mergeFunc text html latex chm
mergeLevels text html latex example chm
plotFreqStat text html latex example chm
plotGenome text html latex example chm
plotHmmStates text html latex example chm
plotSummaryProfile text html latex example chm
states.hmm.func text html latex chm
summarize.clones text html latex example chm
threshold.func text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.4-bioc\meat\aCGH\chm\aCGH.chm
Compile time: 0 minutes, 2 seconds
30 Topics
262 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.4-bioc\meat\aCGH\chm\aCGH.chm, 73,725 bytes
Compression decreased file by 88,886 bytes.
** building package indices ...
** MD5 sums
* DONE (aCGH)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'aCGH_1.18.1.tar.gz'