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Package 89/319HostnameOS / ArchBUILDCHECKBUILD BIN
edgeR 1.2.4
Mark Robinson , Davis McCarthy
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/edgeR
Last Changed Rev: 40848 / Revision: 42512
Last Changed Date: 2009-07-26 06:43:33 -0700 (Sun, 26 Jul 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386 [ OK ] OK  OK 
Package: edgeR
Version: 1.2.4
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD build edgeR
StartedAt: 2009-10-20 16:21:14 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 16:22:27 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 72.1 seconds
RetCode: 0
Status: OK
PackageFile: edgeR_1.2.4.tar.gz
PackageFileSize: 377.8 KiB

Command output

* checking for file 'edgeR/DESCRIPTION' ... OK
* preparing 'edgeR':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package ‘edgeR’ ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
 >>> Building/Updating help pages for package 'edgeR'
     Formats: text html latex example 
  DGEList                           text    html    latex
  EBList                            text    html    latex
  Tu102                             text    html    latex
  alpha.approxeb                    text    html    latex   example
  approx.expected.info              text    html    latex   example
  condLogLikDerDelta                text    html    latex   example
  condLogLikDerSize                 text    html    latex   example
  deDGE                             text    html    latex   example
  deDGEList                         text    html    latex
  estimatePs                        text    html    latex   example
  exactTestNB                       text    html    latex   example
  findMaxD2                         text    html    latex   example
  getData                           text    html    latex   example
  interpolateHelper                 text    html    latex   example
  logLikDerP                        text    html    latex   example
  plotMA                            text    html    latex   example
  quantileAdjust                    text    html    latex   example
  readDGE                           text    html    latex   example
  splitIntoGroups                   text    html    latex   example
  splitIntoGroupsPseudo             text    html    latex   example
  tau2.0.objective                  text    html    latex   example
  topTags                           text    html    latex   example
** building package indices ...
* DONE (edgeR)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'edgeR_1.2.4.tar.gz'