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Package 124/319HostnameOS / ArchBUILDCHECKBUILD BIN
genomeIntervals 1.0.1
Julien Gagneur
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/genomeIntervals
Last Changed Rev: 40538 / Revision: 42512
Last Changed Date: 2009-07-07 08:14:34 -0700 (Tue, 07 Jul 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: genomeIntervals
Version: 1.0.1
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD build genomeIntervals
StartedAt: 2009-10-20 16:24:23 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 16:24:48 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 25.2 seconds
RetCode: 0
Status: OK
PackageFile: genomeIntervals_1.0.1.tar.gz
PackageFileSize: 111.1 KiB

Command output

* checking for file 'genomeIntervals/DESCRIPTION' ... OK
* preparing 'genomeIntervals':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package ‘genomeIntervals’ ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Warning in .findOrCopyClass(class2, classDef2, where, "subclass") :
  Class "Intervals_virtual_or_numeric" is defined (with package slot "intervals") but no metadata object found to revise subclass information---not exported?  Making a copy in package "genomeIntervals"
** help
*** installing help indices
 >>> Building/Updating help pages for package 'genomeIntervals'
     Formats: text html latex example 
  Genome_intervals-class            text    html    latex   example
  Genome_intervals_stranded-class   text    html    latex   example
  c.Genome_intervals                text    html    latex   example
  core_annotated                    text    html    latex   example
  distance_to_nearest-methods       text    html    latex   example
  gen_ints                          text    html    latex
  genomeIntervals-package           text    html    latex
  getGffAttribute                   text    html    latex   example
  interval_overlap-methods          text    html    latex   example
  interval_set_operations-methods   text    html    latex   example
  parseGffAttributes                text    html    latex   example
  readGFF3                          text    html    latex   example
** building package indices ...
* DONE (genomeIntervals)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'genomeIntervals_1.0.1.tar.gz'