oligo 1.8.3
Benilton Carvalho
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/oligo | | Last Changed Rev: 41241 / Revision: 42512 | | Last Changed Date: 2009-08-19 19:22:00 -0700 (Wed, 19 Aug 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'oligo/DESCRIPTION' ... OK
* preparing 'oligo':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* Installing *source* package 'oligo' ...
** libs
making DLL ...
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -Ie:/biocbld/bbs-2.4-bioc/R/src/extra/zlib -DHAVE_ZLIB -I"e:/biocbld/bbs-2.4-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c baseProfile.c -o baseProfile.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -Ie:/biocbld/bbs-2.4-bioc/R/src/extra/zlib -DHAVE_ZLIB -I"e:/biocbld/bbs-2.4-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c basecontent.c -o basecontent.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -Ie:/biocbld/bbs-2.4-bioc/R/src/extra/zlib -DHAVE_ZLIB -I"e:/biocbld/bbs-2.4-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c rma2.c -o rma2.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -Ie:/biocbld/bbs-2.4-bioc/R/src/extra/zlib -DHAVE_ZLIB -I"e:/biocbld/bbs-2.4-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c rma_background2.c -o rma_background2.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -Ie:/biocbld/bbs-2.4-bioc/R/src/extra/zlib -DHAVE_ZLIB -I"e:/biocbld/bbs-2.4-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c rma_common.c -o rma_common.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -Ie:/biocbld/bbs-2.4-bioc/R/src/extra/zlib -DHAVE_ZLIB -I"e:/biocbld/bbs-2.4-bioc/R/library/preprocessCore/include" -O3 -Wall -std=gnu99 -c trimmed.c -o trimmed.o
gcc -shared -s -o oligo.dll tmp.def baseProfile.o basecontent.o rma2.o rma_background2.o rma_common.o trimmed.o -Le:/biocbld/bbs-2.4-bioc/R/bin -lR
... done
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
** help
*** installing help indices
>>> Building/Updating help pages for package 'oligo'
Formats: text html latex example chm
IntensityMatrix-methods text html latex example chm
MAplot-methods text html latex chm
basecontent text html latex example chm
basicRMA text html latex example chm
boxplot text html latex chm
coordinates text html latex example chm
crlmm text html latex chm
getContainer text html latex chm
getCrlmmSummaries text html latex chm
getNgsColorsInfo text html latex chm
hist text html latex chm
image text html latex chm
justSNPRMA text html latex example chm
list.celfiles text html latex example chm
oligo-package text html latex chm
plotM-methods text html latex chm
read.celfiles text html latex example chm
read.xysfiles text html latex example chm
readSummaries text html latex chm
rma text html latex example chm
sequenceDesignMatrix text html latex example chm
snprma text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.4-bioc\meat\oligo\chm\oligo.chm
Compile time: 0 minutes, 1 second
23 Topics
97 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.4-bioc\meat\oligo\chm\oligo.chm, 36,560 bytes
Compression decreased file by 35,739 bytes.
** building package indices ...
** MD5 sums
* DONE (oligo)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'oligo_1.8.3.tar.gz'