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BioC 3.3: BUILD report for coMET on linux2.bioconductor.org

This page was generated on 2015-10-27 12:12:49 -0400 (Tue, 27 Oct 2015).

Package 212/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
coMET 1.3.0
Tiphaine Martin
Snapshot Date: 2015-10-26 20:20:04 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/coMET
Last Changed Rev: 109592 / Revision: 109948
Last Changed Date: 2015-10-13 15:59:53 -0400 (Tue, 13 Oct 2015)
linux2.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded [ ERROR ] skipped 
windows2.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: coMET
Version: 1.3.0
Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data coMET
StartedAt: 2015-10-27 00:39:41 -0400 (Tue, 27 Oct 2015)
EndedAt: 2015-10-27 00:43:08 -0400 (Tue, 27 Oct 2015)
EllapsedTime: 207.8 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data coMET
###
##############################################################################
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* checking for file ‘coMET/DESCRIPTION’ ... OK
* preparing ‘coMET’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet,  : 
  Running 'texi2dvi' on 'coMET.tex' failed.
LaTeX errors:
! pdfTeX error (ext4): \pdfendlink ended up in different nesting level than \pd
fstartlink.
\AtBegShi@Output ...ipout \box \AtBeginShipoutBox 
                                                  \fi \fi 
l.830 \end{longtable}
!  ==> Fatal error occurred, no output PDF file produced!
Calls: <Anonymous> -> texi2pdf -> texi2dvi
Execution halted